title: Extensive genomic abnormalities in childhood medulloblastoma by comparative genomic hybridization.
abstract: We analyzed 27 samples of primary medulloblastoma, using comparative genomic hybridization and a novel statistical approach to evaluate chromosomal regions for significant gain or loss of genomic DNA. An array of nonrandom changes was found in most samples. Two discrete regions of high-level DNA amplification of chromosome bands 5p15.3 and 11q22.3 were observed in 3 of 27 tumors. Nonrandom genomic losses were most frequent in regions on chromosomes 10q (41% of samples), 11 (41%), 16q (37%), 17p (37%), and 8p (33%). Regions of DNA gain most often involved chromosomes 17q (48%) and 7 (44%). These findings suggest a greater degree of genomic imbalance in medulloblastoma than has been recognized previously and highlight chromosomal loci likely to contain oncogenes or tumor suppressor genes that may contribute to the molecular pathogenesis of this tumor.
authors.affiliation: Department of Hematology-Oncology, St. Jude Children's Research Hospital, Memphis, Tennessee 38105, USA.
authors.forename: D A
authors.initials: DA
authors.lastname: Reardon
authors.forename: E
authors.initials: E
authors.lastname: Michalkiewicz
authors.forename: J M
authors.initials: JM
authors.lastname: Boyett
authors.forename: J E
authors.initials: JE
authors.lastname: Sublett
authors.forename: R E
authors.initials: RE
authors.lastname: Entrekin
authors.forename: S T
authors.initials: ST
authors.lastname: Ragsdale
authors.forename: M B
authors.initials: MB
authors.lastname: Valentine
authors.forename: F G
authors.initials: FG
authors.lastname: Behm
authors.forename: H
authors.initials: H
authors.lastname: Li
authors.forename: R L
authors.initials: RL
authors.lastname: Heideman
authors.forename: L E
authors.initials: LE
authors.lastname: Kun
authors.forename: D N
authors.initials: DN
authors.lastname: Shapiro
authors.forename: A T
authors.initials: AT
authors.lastname: Look
mesh_terms: D000293:Adolescent; D002648:Child; D002675:Child, Preschool; D002869:Chromosome Aberrations / Q000235:genetics*; D025063:Chromosome Disorders; D002874:Chromosome Mapping; D004273:DNA, Neoplasm / Q000235:genetics*; D005260:Female; D006801:Humans; D017404:In Situ Hybridization, Fluorescence / Q000379:methods; D007223:Infant; D008297:Male; D008527:Medulloblastoma / Q000235:genetics*; D009693:Nucleic Acid Hybridization / Q000379:methods
chemical_list: D004273:DNA, Neoplasm