A beginner's guide to computer simulation of voltage-gated ion conductances.
This article provides a simple introduction to the simulation of voltage-dependent ion conductances in both macroscopic and single-channel modes. Only Markovian (time-independent) systems are considered. The programmes listed are written in Microsoft QBasic or QuickBASIC but versions in other languages are available. The Hodgkin-Huxley Na+ current is used as a starting system for which an explicit macroscopic solution may be obtained and compared with the results of numerical simulations employing 4th order Runge-Kutta integration. Non-Hodgkin-Huxley behaviour such as voltage-independent inactivation and double exponential current decay are discussed and simulated. A stochastic programme is used to simulate single channel behaviour. The problems and methodologies involved in fitting experimental data using complex kinetic schemes are briefly discussed, as are alternative sources of simulation software.
Elliott
J R
JR
Department of Anatomy and Physiology, University of Dundee, Scotland, U.K.
Bräu
M E
ME
D000818:Animals; D003198:Computer Simulation; D004553:Electric Conductivity; D004594:Electrophysiology; D006801:Humans; D015640:Ion Channel Gating / Q000502:physiology*; D007477:Ions; D008959:Models, Neurological; D012964:Sodium / Q000502:physiology*
D007477:Ions; D012964:Sodium