title: Comparison of pulsed-field gel electrophoresis and phage typing for discriminating poultry strains of Staphylococcus aureus.
abstract: OBJECTIVE
  To compare pulsed-field gel electrophoresis (PFGE) patterns of Staphylococcus aureus from chickens in England, Belgium, Bulgaria, Argentina, and Japan, to assess the value of PFGE for discriminating strains, and to compare results obtained by PFGE with those obtained by biotyping and phage typing.
  
  
  METHODS
  78 S aureus isolates from diseased and healthy chickens.
  
  
  METHODS
  Chromosomal DNA of S aureus was digested with restriction endonuclease Sma I, and fragments were separated by PFGE in 1% agarose gel.
  
  
  RESULTS
  All 78 strains from 5 countries were classified as poultry ecovar according to a previously established biotyping system. Chromosomal DNA was cut by Sma I into 18 to 23 fragments ranging from about 3 to 685 kb. Seventy-eight strains produced 15 types, arbitrarily designated A to O, and 45 subtypes. Some differences were observed in PFGE patterns among countries. However, 10 fragments (333, 190, 110, 63, 55, 42, 34, 19, 10, and 3 kb) were highly conserved and were shared by almost all (> 78%) of the strains examined. The PFGE patterns were compared with those obtained by phage typing. All 29 strains belonging to avian phage-group II produced type A and 19 subtypes. Of the 15 strains belonging to phage-group I, 11 produced 8 types (B to H, O) and 5 subtypes that were different from those of type A.
  
  
  CONCLUSIONS
  Genomic DNA fingerprinting by PFGE is an effective technique for discriminating poultry S aureus strains and appears to be a useful method for subtyping strains of avian phage groups or the poultry-specific ecovar.
authors.affiliation: Department of Microbiology and Immunology, Faculty of Agriculture, Kobe University, Japan.
authors.forename: A
authors.initials: A
authors.lastname: Shimizu
authors.forename: J
authors.initials: J
authors.lastname: Kawano
authors.forename: C
authors.initials: C
authors.lastname: Yamamoto
authors.forename: O
authors.initials: O
authors.lastname: Kakutani
authors.forename: M
authors.initials: M
authors.lastname: Fujita
mesh_terms: D000818:Animals; D001118:Argentina / Q000453:epidemiology; D001434:Bacteriophage Typing / Q000379:methods / Q000662:veterinary*; D001530:Belgium / Q000453:epidemiology; D002031:Bulgaria / Q000453:epidemiology; D002645:Chickens; D016172:DNA Fingerprinting / Q000379:methods / Q000662:veterinary; D004269:DNA, Bacterial / Q000032:analysis / Q000235:genetics; D016521:Electrophoresis, Gel, Pulsed-Field / Q000379:methods / Q000662:veterinary*; D004739:England / Q000453:epidemiology; D007564:Japan / Q000453:epidemiology; D011201:Poultry Diseases / Q000175:diagnosis / Q000453:epidemiology / Q000382:microbiology*; D013203:Staphylococcal Infections / Q000453:epidemiology / Q000382:microbiology / Q000662:veterinary*; D013211:Staphylococcus aureus / Q000145:classification* / Q000235:genetics
chemical_list: D004269:DNA, Bacterial