Similarities of hydrolytic antibodies revealed by their X-ray structures: a review.
Numerous antibodies have been programmed to catalyse the hydrolysis of esters as well as other acyl transfer reactions. They were raised against stable analogues that model the structure of the tetrahedral transition states of these reactions. The three-dimensional structures of four hydrolytic antibodies complexed to their respective phosphonate transition state analogues (TSAs) reveal a similar orientation of hapten relative to the antibody. Analysis of the four combining sites suggests that residues binding the phosphonate TSA stabilise the oxyanion intermediate of the reaction and play a preponderant role in catalysis. Comparison of catalytic antibodies selected from the same hybridoma fusion indicates a high similarity of the motifs that catalyse the hydrolysis of a given substrate.
Charbonnier
J B
JB
Laboratorie d'Enzymologie et Biochimie Structurales, UPR 9063 CNRS, Gif-sur-Yvette, France.
Gigant
B
B
Golinelli-Pimpaneau
B
B
Knossow
M
M
D000838:Anions; D017151:Antibodies, Catalytic / Q000737:chemistry* / Q000378:metabolism; D002384:Catalysis; D018360:Crystallography, X-Ray; D006241:Haptens / Q000276:immunology; D006868:Hydrolysis; D063065:Organophosphonates / Q000378:metabolism; D011487:Protein Conformation
D000838:Anions; D017151:Antibodies, Catalytic; D006241:Haptens; D063065:Organophosphonates