Monte Carlo simulation of the kinetics of protein adsorption.
Adsorption of proteins occurs via diffusion toward the interface, actual adsorption, and subsequent irreversible conformational changes resulting in denaturation of the native protein structure. The conventional kinetic models describing these steps are based on the assumption that the denaturation transitions obey the first-order law with a single value of the denaturation rate constant kappar. Meanwhile, recent Monte Carlo simulations indicate that, in general, the denaturation process cannot be described by a single rate constant kappar. One should rather introduce a distribution of this rate constant (physically, different values of kappar correspond to the transitions to the altered state via different metastable states). We have calculated the kinetics of irreversible adsorption of proteins with and without distribution of the denaturation rate constant kappar in the limits when protein diffusion in the solution is, respectively, rapid or slow. In both cases, the adsorption kinetics with distribution of kappar are found to be close to those with a single-valued rate constant kappar provided that the average value of kappar in the former case is equal to kappar for the latter case. This conclusion holds even for wide distributions of kappar. The consequences of this finding for the fitting of global experimental kinetics on the basis of phenomenological equations are briefly discussed.
Zhdanov
V P
VP
Department of Applied Physics, Chalmers University of Technology, Göteborg, Sweden. zhdanov@catalysis.nsk.su
Kasemo
B
B
D000327:Adsorption; D004058:Diffusion; D007700:Kinetics; D009010:Monte Carlo Method; D011487:Protein Conformation; D011489:Protein Denaturation; D011506:Proteins / Q000737:chemistry*; D013499:Surface Properties
D011506:Proteins