An ab initio approach to the understanding of cytochrome P450-ligand interactions.
1. We describe the application of novel ab initio quantum mechanical methods to the study of ligand interactions with cytochrome P450cam (CYP101). 2. We find that our techniques accurately describe the transition from a low-spin state to a high-spin state of the haem Fe3+ on binding of a substrate. Furthermore, our methods correctly predict that a large fraction of low-spin character is retained on binding of an inhibitor. 3. We demonstrate the use of 'computational experiments' to elucidate key features of the mechanism of interaction. This leads us to identify a new mechanism for the suppression of the low- to high-spin transition on binding of an inhibitor, namely the shortening of the bond between the Fe atom and the coordinated S atom of the cysteine axial ligand.
Segall
M D
MD
Cavendish Laboratory (TCM), University of Cambridge, UK.
Payne
M C
MC
Ellis
S W
SW
Tucker
G T
GT
Boyes
R N
RN
D019475:Camphor 5-Monooxygenase / Q000378:metabolism*; D003198:Computer Simulation; D008024:Ligands; D008962:Models, Theoretical; D011485:Protein Binding; D011789:Quantum Theory
D008024:Ligands; D019475:Camphor 5-Monooxygenase