Structural differences between the repertoires of mouse and human germline genes and their evolutionary implications.
Although human and mouse antibodies are similar when one considers their diversification strategies, they differ in the extent to which kappa and lambda light chains are present in their respective variable light chain repertoires. While the Igk-V germline genes are preponderant in mice (95% or more), they comprise only 60% in humans. This may account for differences in the structural repertoire encoded in the Igk-V germline genes of these species. However, this subject has not been properly investigated, partially because a systematic structural characterization of the mouse Igk-V germline genes has not been undertaken. In the present study we compiled all available information on mouse Igk-V germline genes to characterize their structural repertoire. As expected, comparison with the structural repertoire of human Igk-V germline genes indicates differences. The most interesting is that the mouse Igk-V germline gene repertoire is more diverse in structural terms than its human counterpart: the mouse encodes seven canonical structure classes (combination of canonical structures in L1 and L3). In contrast, the human encodes only four. Analysis of the evolutionary relationships of human and mouse Igk-V germline genes led us to propose that the difference reflects a strategy of mice to compensate for the small lambda chain contribution to the repertoire of their variable light chains.
Almagro
J C
JC
Instituto de Biotecnologia, Universidad Nacional Autónoma de México, Cuernavaca, APDO.POSTAL 510-3, Cuernavaca, Morelos 62250, México.
Hernández
I
I
Ramírez
M C
MC
Vargas-Madrazo
E
E
D000595:Amino Acid Sequence; D000818:Animals; D000916:Antibody Diversity / Q000235:genetics*; D019143:Evolution, Molecular; D018628:Gene Dosage; D005796:Genes / Q000235:genetics; D005803:Genes, Immunoglobulin / Q000235:genetics*; D005854:Germ Cells / Q000276:immunology / Q000378:metabolism*; D006801:Humans; D007135:Immunoglobulin Variable Region / Q000235:genetics*; D007145:Immunoglobulin kappa-Chains / Q000235:genetics*; D051379:Mice; D008969:Molecular Sequence Data; D005810:Multigene Family / Q000235:genetics; D010802:Phylogeny; D011544:Pseudogenes / Q000235:genetics; D016415:Sequence Alignment
D007135:Immunoglobulin Variable Region; D007145:Immunoglobulin kappa-Chains