Interaction potentials for protein folding.
We outline a general strategy for determining the effective coarse-grained interactions between the amino acids of a protein from the experimentally derived native-state structures. The method is, in principle, free from any adjustable or empirically determined parameters, and it is tested on simple models and compared with other existing approaches.
Seno
F
F
Istituto Nazionale per la Fisica della Materia, Dipartimento di Fisica G. Galilei, Università di Padova, Italy. seno@mvxpd5.pd.infn.it
Maritan
A
A
Banavar
J R
JR
D000596:Amino Acids / Q000378:metabolism; D017510:Protein Folding; D011506:Proteins / Q000737:chemistry*
D000596:Amino Acids; D011506:Proteins