Presence of a fibronectin type III domain in a plant protein.
A hidden Markov model (HMM) approach was used to identify potential candidates in sequence databases for fibronectin type III domains in plants, a kingdom heretofore bereft of these structures. Fortuitously, one of the proteins uncovered had already had a crystal structure published, allowing direct structural confirmation of the existence of this domain in plants.
Tsyguelnaia
I
I
Doolittle
R F
RF
D000135:Acid Phosphatase / Q000737:chemistry / Q000378:metabolism; D000595:Amino Acid Sequence; D001665:Binding Sites; D005353:Fibronectins / Q000378:metabolism*; D006023:Glycoproteins / Q000737:chemistry / Q000378:metabolism; D006801:Humans; D008390:Markov Chains; D008958:Models, Molecular; D008969:Molecular Sequence Data; D010940:Plant Proteins / Q000737:chemistry* / Q000378:metabolism*; D011487:Protein Conformation; D016415:Sequence Alignment
D005353:Fibronectins; D006023:Glycoproteins; D010940:Plant Proteins; C091137:purple acid phosphatase; D000135:Acid Phosphatase