title: Single turnover mechanism of a trypsin-reactor with high enzyme concentration.
abstract: A small column containing 2 mM CH-Sepharose 4B-immobilized trypsin was connected to a flow injection device equipped for potentiometric measurements (0.01-2 mM protons) and for post-column analysis by spectrophotometry and capillary electrophoresis (CE). The device was engaged with N alpha-benzoyl-L-arginine pNO2-anilide (BAPNA), beta-lactoglobulin (beta-Lac) and peptides of V8-protease predigested beta-Lac. At a given flow rate, the reaction with BAPNA or beta-Lac (below 2 mM) produced about 1 proton per substrate molecule in each sample (linear relation to substrate amount); with peptides (below 22 mM), the reaction did not exceed 0.17 acid equivalents per substrate molecule (hyperbolic dependence). Final experiments demonstrated that the reactor gave a correct estimate of available lysine in peptides of beta-Lac modified with 5-nitrosalicylaldehyde. The data could be predicted by a kinetic model describing the reactor performance in 'single turnover' conditions. The interplay between resident time and the non-catalytic amount of trypsin prevented each enzyme molecule from recycling as well as each substrate molecule (containing one or more cleavage sites) from encountering the enzyme more than once. In conclusion, both from the experimental and the theoretical point of view, this work permitted the analysis of trypsin behaviour in some extreme working conditions and indicates how to modulate the performance of an endoprotease-based reactor. A brief discussion on potential applications in protein mapping and tagging and in the quantitative analysis of protein bioavailability by means of a biosensorial strategy is also described.
authors.affiliation: Istituto di Biochimica Veterinaria, Università di Parma, Italy.
authors.forename: P
authors.initials: P
authors.lastname: Fermi
authors.forename: R
authors.initials: R
authors.lastname: Biffi
authors.forename: V
authors.initials: V
authors.lastname: Conti
authors.forename: R
authors.initials: R
authors.lastname: Ramoni
authors.forename: S
authors.initials: S
authors.lastname: Grolli
authors.forename: P
authors.initials: P
authors.lastname: Accornero
authors.forename: E
authors.initials: E
authors.lastname: Bignetti
mesh_terms: D000595:Amino Acid Sequence; D000818:Animals; D001586:Benzoylarginine Nitroanilide / Q000378:metabolism; D015374:Biosensing Techniques; D002417:Cattle; D019075:Electrophoresis, Capillary; D004800:Enzymes, Immobilized; D017022:Flow Injection Analysis / Q000295:instrumentation; D006868:Hydrolysis; D007700:Kinetics; D007782:Lactoglobulins / Q000737:chemistry / Q000378:metabolism; D008969:Molecular Sequence Data; D010179:Pancreas / Q000201:enzymology; D010446:Peptide Fragments / Q000737:chemistry / Q000378:metabolism; D011199:Potentiometry; D012697:Serine Endopeptidases / Q000378:metabolism; D013053:Spectrophotometry; D014357:Trypsin / Q000378:metabolism*
chemical_list: D004800:Enzymes, Immobilized; D007782:Lactoglobulins; D010446:Peptide Fragments; D001586:Benzoylarginine Nitroanilide; D012697:Serine Endopeptidases; C028344:glutamyl endopeptidase; D014357:Trypsin