title: Molecular characterization and sequencing of antifreeze proteins from larvae of the beetle Dendroides canadensis.
abstract: The deduced amino acid sequences of antifreeze proteins (AFPs) from larvae of the beetle Dendroides canadensis were determined from both complementary DNAs (cDNAs) and from peptide sequencing. These consisted of proteins with a 25-residue signal peptide and mature proteins 83 (Dendroides antifreeze protein; DAFP-1) or 84 (DAFP-2) amino acids in length which differed at only two positions. Peptide sequencing yielded sequences which overlapped exactly with those of the deduced cDNA sequences of DAFP-1 and DAFP-2, while the partial sequence of another AFP (DAFP-3) matched 21 of 28 residues. Seven 12- or 13-mer repeating units are present in these antifreeze proteins with a consensus sequence consisting of: Cys-Thr-X3-Ser-X5-X6-Cys-X8-X9-Ala-X11-Thr-X1 3, where X3 and X11 tend toward charged residues, X5 tends toward threonine or serine, X6 toward asparagine or aspartate, X9 toward asparagine or lysine, and X13 toward alanine in the 13-mers. The most interesting feature of these proteins is that throughout the length of the mature antifreeze proteins every sixth residue is a cysteine. These sequences are not similar to any of the known fish AFPs, but they are similar to AFPs from the beetle Tenebrio molitor.
authors.affiliation: Department of Biological Sciences, University of Notre Dame, IN 46556, USA. john.g.duman.1@nd.edu
authors.forename: J G
authors.initials: JG
authors.lastname: Duman
authors.forename: N
authors.initials: N
authors.lastname: Li
authors.forename: D
authors.initials: D
authors.lastname: Verleye
authors.forename: F W
authors.initials: FW
authors.lastname: Goetz
authors.forename: D W
authors.initials: DW
authors.lastname: Wu
authors.forename: C A
authors.initials: CA
authors.lastname: Andorfer
authors.forename: T
authors.initials: T
authors.lastname: Benjamin
authors.forename: D C
authors.initials: DC
authors.lastname: Parmelee
mesh_terms: D000595:Amino Acid Sequence; D000818:Animals; D021301:Antifreeze Proteins; D001483:Base Sequence; D001517:Coleoptera / Q000235:genetics* / Q000254:growth & development; D018076:DNA, Complementary / Q000235:genetics; D005399:Fishes; D005615:Freezing; D006023:Glycoproteins / Q000235:genetics*; D007814:Larva / Q000235:genetics; D008969:Molecular Sequence Data; D017386:Sequence Homology, Amino Acid
chemical_list: D021301:Antifreeze Proteins; D018076:DNA, Complementary; D006023:Glycoproteins