title: Detection of K-ras point mutations in the supernatants of peritoneal and pleural effusions for diagnosis complementary to cytologic examination.
abstract: To determine whether DNA analysis can be performed using the supernatants of body fluids after centrifugation at 2,000 rpm for 10 minutes, peritoneal or pleural effusions or bile were examined for K-ras mutations in 34 cases of pancreatic, colorectal, gastric, esophageal, or hepatocellular carcinoma and 15 noncancer cases. The polymerase chain reaction products for K-ras gene codons 2 to 97 of exons 1 and 2 were generated with 41 (93%) of 44 body cavity fluid and 5 (100%) of 5 bile samples. By the single strand conformation polymorphism method, point mutations were detected in the ascites supernatants of 8 (89%) of 9 cases of pancreatic carcinoma. In the remaining case, no point mutation was demonstrated because few malignant cells were present in the ascites fluid. Furthermore, K-ras point mutations were observed in the ascites supernatants of 2 cases of colorectal carcinoma and 1 case of gastric carcinoma. The DNA analysis of the supernatant of ascites fluid showed a K-ras point mutation in 3 cases of false-negative cytologic diagnosis (2 cases of pancreatic carcinoma and 1 case of colorectal carcinoma). Direct sequencing confirmed identical point mutations in the supernatants, whole cell pellets, malignant cells from the cytologic smears of ascites fluid, and cancer tissues. This novel method allows simultaneous testing for genetic abnormalities in supernatants of body fluid, after removing cells for cytologic diagnosis.
authors.affiliation: Department of Pathology, Kitasato University East Hospital, Sagamihara, Kanagawa, Japan.
authors.forename: K
authors.initials: K
authors.lastname: Yamashita
authors.forename: T
authors.initials: T
authors.lastname: Kuba
authors.forename: H
authors.initials: H
authors.lastname: Shinoda
authors.forename: E
authors.initials: E
authors.lastname: Takahashi
authors.forename: I
authors.initials: I
authors.lastname: Okayasu
mesh_terms: D001202:Ascitic Fluid / Q000737:chemistry*; D001483:Base Sequence; D001646:Bile / Q000737:chemistry; D006528:Carcinoma, Hepatocellular / Q000737:chemistry; D015179:Colorectal Neoplasms / Q000235:genetics; D003581:Cytodiagnosis; D004247:DNA / Q000032:analysis*; D005091:Exons; D005188:False Negative Reactions; D011905:Genes, ras; D006801:Humans; D008113:Liver Neoplasms / Q000737:chemistry; D009369:Neoplasms / Q000235:genetics*; D010190:Pancreatic Neoplasms / Q000235:genetics; D010996:Pleural Effusion / Q000737:chemistry*; D017354:Point Mutation; D016133:Polymerase Chain Reaction; D018807:Polymorphism, Single-Stranded Conformational; D017422:Sequence Analysis, DNA; D013274:Stomach Neoplasms / Q000235:genetics
chemical_list: D004247:DNA