title: A major protein precursor of zebra mussel (Dreissena polymorpha) byssus: deduced sequence and significance.
abstract: The zebra mussel is a nonindigenous invader of North American lakes and rivers and one of the few freshwater bivalve molluscs having a byssus--a sclerotized organ used by the mussel for opportunistic attachment to hard surfaces. We have sequenced a foot-specific cDNA whose composite protein sequence was deduced from a series of overlapping but occasionally nonidentical cDNA fragments. The overall deduced sequence matches tryptic peptides from a major byssal precursor protein--Dreissena polymorpha foot protein 1 (Dpfp1). The calculated mass of Dpfp1 is 49 kDa; but this is known to be extensively hydroxylated and O-glycosylated during maturation. Purified native Dpfp1 analyzed using matrix-assisted laser-desorption ionization mass spectrometry with time-of-flight indicates that the protein occurs as at least two size variants with masses of 48.6 and 54.5 kDa. In all probability, the sequence variants reported in this study are related to the larger mass variant. Dpfp1 has a block copolymer-like structure defined by two consensus motifs that are sharply segregated into domains. The N-terminal side of Dpfp1 has 22 tandem repeats of a heptapeptide consensus (P-[V/E]-Y-P-[T/S/delta]-[K/Q]-X); the C-terminal side has 16 repeats of a tridecapeptide motif (K-P-G-P-Y-D-Y-D-G-P-Y-D-K). Both consensus repeats are unique, with some limited homology to other proteins functioning in tension: marine mussel adhesives, plant extensins, titin, and trematode eggshell precursors.
authors.affiliation: College of Marine Studies, Newark, Delaware 19716, USA.
authors.forename: K E
authors.initials: KE
authors.lastname: Anderson
authors.forename: J H
authors.initials: JH
authors.lastname: Waite
mesh_terms: D000595:Amino Acid Sequence; D000818:Animals; D001483:Base Sequence; D049872:Bivalvia / Q000145:classification* / Q000235:genetics*; D003001:Cloning, Molecular; D003062:Codon; D016384:Consensus Sequence; D017931:DNA Primers; D005618:Fresh Water; D006023:Glycoproteins / Q000096:biosynthesis* / Q000737:chemistry; D008969:Molecular Sequence Data; D009656:North America; D010446:Peptide Fragments / Q000737:chemistry; D016133:Polymerase Chain Reaction; D011498:Protein Precursors / Q000096:biosynthesis* / Q000737:chemistry; D011994:Recombinant Proteins / Q000096:biosynthesis / Q000737:chemistry; D016415:Sequence Alignment; D017384:Sequence Deletion; D017386:Sequence Homology, Amino Acid; D012689:Sequence Homology, Nucleic Acid
chemical_list: D003062:Codon; D017931:DNA Primers; C112625:Dpfp1 protein, Dreissena polymorpha; D006023:Glycoproteins; D010446:Peptide Fragments; D011498:Protein Precursors; D011994:Recombinant Proteins