title: Thermodynamics of a transition state analogue inhibitor binding to Escherichia coli chorismate mutase: probing the charge state of an active site residue and its role in inhibitor binding and catalysis.
abstract: Electrostatic interactions play important roles in the catalysis of chorismate to prephenate by chorismate mutase. Mutation of Gln88 to glutamate in the monofunctional chorismate mutase from Escherichia coli results in an enzyme with a pH profile of activity significantly different from that of the wild type protein. To investigate whether the mutation alters the substrate binding process or the catalysis, we have directly determined the thermodynamic parameters of a transition state analogue inhibitor binding to the wild-type chorismate mutase and its Q88E mutant using isothermal titration calorimetry. The results demonstrate that solvent reorganization and hydrophobic interactions contribute the predominant free energy to inhibitor binding. The charge state of Glu88 in the Q88E mutant was experimentally determined and was shown to be protonated at pH 4.5 and ionized at pH 7.8, consistent with earlier hypotheses. Most surprisingly, inhibitor binding energetics do not exhibit significant pH dependency for both enzymes. Our findings indicate that the charge state of Glu88 has a small impact on inhibitor binding but plays an important role in the catalytic process.
authors.affiliation: Structural Biochemistry Program, SAIC Frederick, National Cancer Institute-Frederick Cancer Research and Development Center, Maryland 21702-1201, USA.
authors.forename: A Y
authors.initials: AY
authors.lastname: Lee
authors.forename: S
authors.initials: S
authors.lastname: Zhang
authors.forename: P
authors.initials: P
authors.lastname: Kongsaeree
authors.forename: J
authors.initials: J
authors.lastname: Clardy
authors.forename: B
authors.initials: B
authors.lastname: Ganem
authors.forename: J W
authors.initials: JW
authors.lastname: Erickson
authors.forename: D
authors.initials: D
authors.lastname: Xie
mesh_terms: D019943:Amino Acid Substitution / Q000235:genetics; D001665:Binding Sites / Q000187:drug effects / Q000235:genetics; D002151:Calorimetry; D002384:Catalysis / Q000187:drug effects; D002826:Chorismate Mutase / Q000037:antagonists & inhibitors* / Q000737:chemistry* / Q000235:genetics; D004791:Enzyme Inhibitors / Q000737:chemistry* / Q000494:pharmacology; D004926:Escherichia coli / Q000201:enzymology* / Q000235:genetics; D018698:Glutamic Acid / Q000235:genetics; D005973:Glutamine / Q000737:chemistry* / Q000235:genetics; D006863:Hydrogen-Ion Concentration; D016297:Mutagenesis, Site-Directed; D011522:Protons; D013816:Thermodynamics
chemical_list: D004791:Enzyme Inhibitors; D011522:Protons; D005973:Glutamine; D018698:Glutamic Acid; D002826:Chorismate Mutase