The forces driving molecular evolution.
Competitive replication among RNA or DNA molecules at linear and non-linear rates of propagation has been reviewed from the perspective of a recent physicochemical model of molecular evolution and the findings are applied to pre-replication, prebiotic and biological evolution. A system of competitively replicating molecules was seen to follow a path of least action on both its thermodynamic and kinetic branch, in evolving toward steady state kinetics and equilibrium for the nucleotide condensation reaction. Stable and unstable states of coexistence, between competing molecular species, arise at nonlinear rates of propagation, and they derive from an equilibrium between kinetic forces. The de novo formation of self-replicating RNA molecules involves damping of these scalar forces, error tolerance and RNA driven strand separation. Increases in sequence complexity in the transition to self-replication does not exceed the free energy dissipated in RNA synthesis. Retrodiction of metabolic pathways and phylogenetic evidence point to the occurrence of three pre-replication metabolic systems, driven by autocatalytic C-fixation cycles. Thermodynamic and kinetic factors led to the replication take over. Biological evolution was found to involve resource capture, in addition to competition for a shared resource.
Research Foundation of Southern California Inc., La Jolla 92037, USA.
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Davis
D001105:Archaea / Q000145:classification / Q000235:genetics; D004247:DNA / Q000096:biosynthesis*; D004261:DNA Replication; D019143:Evolution, Molecular; D007700:Kinetics; D008962:Models, Theoretical; D010802:Phylogeny; D012313:RNA / Q000096:biosynthesis*; D013816:Thermodynamics
D012313:RNA; D004247:DNA