Structure of a highly acidic O-specific polysaccharide of lipopolysaccharide of Pseudoalteromonas haloplanktis KMM 223 (44-1) containing L-iduronic acid and D-QuiNHb4NHb.
An acidic O-specific polysaccharide was obtained by mild acid degradation of the lipopolysaccharide isolated by phenol-water extraction of Pseudoalteromonas haloplanktis strain KMM 223 (44-1). L-Iduronic acid (IdoA) was found to be a component of the polysaccharide and identified by NMR spectroscopy and after carboxyl-reduction followed by acid hydrolysis and acetylation, by GLC-MS as 2,3,4-tri-O-acetyl-1,6-anhydroidose. On the basis of 1H and 13C NMR spectroscopic studies, including 1D NOE, 2D NOESY, HSQC and HMBC experiments, the following structure of the branched pentasaccharide repeating unit of the polysaccharide was established: -->4)-beta-D-GlcpAI-(1-->4)-beta-D-GlcpAII-(1-->3)-beta-D-++ +QuipNHb4NHbII- (1-->2)-alpha-L-IdopA-(-->4 increases 1 alpha-D-QuipNAc4NAcI where QuiNAc4NAc and QuiNHb4NHb are 2,4-diacetamido-2,4,6-trideoxyglucose and 2,4,6-tri-deoxy-2,4- di[(S)-3-hydroxybutyramido]glucose, respectively. This is the first report of L-iduronic acid in a lipopolysaccharide and of D-QuiNHb4NHb in nature.
Hanniffy
O M
OM
Department of Chemistry, University College, Galway, Ireland.
Shashkov
A S
AS
Senchenkova
S N
SN
Tomshich
S V
SV
Komandrova
N A
NA
Romanenko
L A
LA
Knirel
Y A
YA
Savage
A V
AV
D002240:Carbohydrate Sequence; D008401:Gas Chromatography-Mass Spectrometry; D005944:Glucosamine / Q000031:analogs & derivatives* / Q000737:chemistry; D006088:Gram-Negative Aerobic Bacteria / Q000737:chemistry*; D007067:Iduronic Acid / Q000737:chemistry*; D008070:Lipopolysaccharides / Q000737:chemistry*; D008969:Molecular Sequence Data; D019906:Nuclear Magnetic Resonance, Biomolecular
C014459:2,4-diamino-2,4,6-trideoxy-D-glucose; D008070:Lipopolysaccharides; D007067:Iduronic Acid; D005944:Glucosamine