Bovine hemoglobin alpha-globin chain polymorphism: primary structure determination of two new genetic variants by mass spectrometry and amino acid sequencing.
The present work describes the biochemical procedures used to identify the cause of a quantitative and qualitative hemoglobin polymorphism found in Podolian cattle. First, to analyze the different phenotypes, isoelectric focusing (IEF) of hemoglobins and RP-HPLC of globin chains was carried out; secondly, to determine accurately the globin molecular masses, electrospray mass spectrometry was performed and finally to check the entire amino acid sequences of the proteins, several enzymatic digests were analyzed by fast atom bombardment mass spectrometry (FAB-MS) and Edman degradation procedure. As to the qualitative polymorphism, the results of RP-HPLC show the presence of two alpha-globin variants to which the extensive mass spectrometric analysis attributed a molecular mass of 15,026.47 +/- 0.44 Da and 15,079.86 +/- 0.66 Da and whose respective primary structure differed from that of the common alpha-globin chain in the amino acid substitution Asn-->Ser at position 131 and the other in the replacement of the histidine residue at position 89 with tyrosine. As to the quantitative polymorphism, on the basis of the expression gradient found out in the duplicated alpha genes of several mammals, we conceive that the alpha 89 His-->Tyr is an allelic form of the I alpha gene while the alpha 131Asn-->Ser is an allelic form of the II alpha gene.
IABBAM, Consiglio Nazionale delle Ricerche, Ponticelli, Naples, Italy.
A
A
Scaloni
E
E
Pieragostini
A
A
Malorni
L
L
Ferrara
A
A
Di Luccia
D000595:Amino Acid Sequence; D000818:Animals; D016164:Bison / Q000235:genetics; D002417:Cattle / Q000235:genetics*; D002851:Chromatography, High Pressure Liquid; D014644:Genetic Variation; D005914:Globins / Q000737:chemistry / Q000235:genetics*; D006454:Hemoglobins / Q000737:chemistry / Q000235:genetics*; D046911:Macromolecular Substances; D013058:Mass Spectrometry; D008969:Molecular Sequence Data; D011110:Polymorphism, Genetic; D012418:Ruminants / Q000235:genetics; D016415:Sequence Alignment; D017386:Sequence Homology, Amino Acid; D013045:Species Specificity
D006454:Hemoglobins; D046911:Macromolecular Substances; D005914:Globins