A solution NMR study of the selectively 13C, 15N-labeled peptaibol chrysospermin C in methanol.
The conformation of the 19-residue peptaibol chrysospermin C in methanol has been investigated by NMR spectroscopy using selective 15N and 13C labeling of the alpha-aminoisobutyric acid (Aib) residues. Complete 1H and 13C sequential assignments, including stereospecific assignments for the heavily overlapped resonances from the two Cbeta methyl groups of the eight Aib residues, are reported for a peptaibol for the first time. An Aib residue followed by a Pro is an exception to previous suggestions regarding stereospecific assignment of the two Cbeta methyl groups of Aib residues. Local nuclear Overhauser effects and 3J(HNC') and 3J(HNCbeta) scalar couplings indicate that the phi angles of the Aib residues are restricted sterically to local conformations consistent with right-handed helices. Despite these constraints on the eight Aib residues, the NMR data for chrysospermin C in methanol are generally most consistent with an ensemble of transient conformations, including backbone conformations inconsistent with helical structures. Initial NMR measurements for chrysospermin C bound to micelles suggest structural and dynamic differences relative to alamethicin bound to micelles which may be related to differences in gating voltages for formation of ion channels.
Anders
R
R
Institut für Molekulare Biotechnologie, e. V., Jena, Germany.
Wenschuh
H
H
Soskic
V
V
Fischer-Frühholz
S
S
Ohlenschläger
O
O
Dornberger
K
K
Brown
L R
LR
D000595:Amino Acid Sequence; D000900:Anti-Bacterial Agents / Q000737:chemistry*; D000935:Antifungal Agents / Q000737:chemistry; D009682:Magnetic Resonance Spectroscopy; D000432:Methanol / Q000494:pharmacology; D008968:Molecular Conformation; D008969:Molecular Sequence Data; D054848:Peptaibols; D010455:Peptides; D010767:Phosphorylcholine / Q000031:analogs & derivatives / Q000494:pharmacology; D017433:Protein Structure, Secondary
D000900:Anti-Bacterial Agents; D000935:Antifungal Agents; D054848:Peptaibols; D010455:Peptides; C096631:chrysospermin C; D010767:Phosphorylcholine; C028810:dodecylphosphocholine; D000432:Methanol