title: Characterization of the 5'-flanking promoter region of the rat somatostatin receptor subtype 3 gene.
abstract: We investigated the 5'-flanking promoter region of the rat somatostatin receptor subtype 3 (rSSTR3). Using a cDNA probe, genomic clones containing the 5'-flanking promoter region of the rSSTR3 gene were isolated. A sequence of 5.4 kb directly upstream from the start codon was analyzed and two introns were found in the 5' untranslated region (UTR) of the cDNA sequence. The transcriptional initiation site was determined by 5' rapid amplification of cDNA ends (RACE), primer extension and RNase protection analysis with cerebellar RNA. Two major transcriptional initiation sites were found at position 1040 (tsp1) and -856 (tsp2) relative to the translational initiation site. Like a number of other promoters of G-protein-coupled receptors, the rSSTR3 gene lacks TATA and CAAT motifs and includes G+C-rich regions. Functional analysis of the promoter region by transfecting rSSTR3 luciferase-reporter gene constructs into rat pituitary GH3 cells and HEK 293 cells indicated that a 107-bp region upstream of tsp2 was sufficient to drive transcription. Furthermore a 562-bp region at position -1304 to -1865 upstream of the ATG start codon exerted a negative regulatory effect on transcriptional activity.
authors.affiliation: Institut für Zellbiochemie und klinische Neurobiologie, UKE, Universität Hamburg, Germany.
authors.forename: M
authors.initials: M
authors.lastname: Glos
authors.forename: H J
authors.initials: HJ
authors.lastname: Kreienkamp
authors.forename: H
authors.initials: H
authors.lastname: Hausmann
authors.forename: D
authors.initials: D
authors.lastname: Richter
mesh_terms: D020121:5' Untranslated Regions / Q000235:genetics; D000818:Animals; D002460:Cell Line; D002531:Cerebellum; D018387:Codon, Initiator / Q000235:genetics; D005786:Gene Expression Regulation; D017930:Genes, Reporter; D015698:Genomic Library; D006801:Humans; D007438:Introns / Q000235:genetics; D007668:Kidney; D010911:Pituitary Neoplasms; D011401:Promoter Regions, Genetic / Q000235:genetics*; D012333:RNA, Messenger / Q000032:analysis; D051381:Rats; D017481:Receptors, Somatostatin / Q000235:genetics*; D020218:Response Elements / Q000235:genetics; D017384:Sequence Deletion; D014162:Transfection; D014407:Tumor Cells, Cultured
chemical_list: D020121:5' Untranslated Regions; D018387:Codon, Initiator; D012333:RNA, Messenger; D017481:Receptors, Somatostatin; C103631:somatostatin receptor 3