title: Flagellin gene variation between clinical and environmental isolates of Burkholderia pseudomallei contrasts with the invariance among clinical isolates.
abstract: The flagellin gene sequence from a clinical isolate of Burkholderia pseudomallei was used to design oligonucleotide primers for PCR/RFLP analysis of flagellin gene variation among clinical and environmental isolates of B. pseudomallei. Genes from four clinical and six environmental isolates were amplified and compared by RFLP. The clinical isolates were indistinguishable, but variation was detected among some of the environmental isolates. Sequence analysis of flagellin gene amplified products demonstrated high levels of conservation amongst the flagellin genes of clinical isolates (>99% similarity), compared to the variation observed between the clinical isolates and one of the environmental isolates (<90% similarity). Genomic comparisons with pulsed-field gel electrophoresis (PFGE) revealed differences between the relationships inferred by flagellin genotyping and PFGE, suggesting that a combination of molecular methods may be useful for the subtyping of B. pseudomallei strains.
authors.affiliation: Department of Biomedical Sciences, University of Bradford, West Yorkshire.
authors.forename: C
authors.initials: C
authors.lastname: Winstanley
authors.forename: B A
authors.initials: BA
authors.lastname: Hales
authors.forename: J E
authors.initials: JE
authors.lastname: Corkill
authors.forename: M J
authors.initials: MJ
authors.lastname: Gallagher
authors.forename: C A
authors.initials: CA
authors.lastname: Hart
mesh_terms: D001425:Bacterial Outer Membrane Proteins / Q000235:genetics; D001483:Base Sequence; D016957:Burkholderia pseudomallei / Q000235:genetics*; D003001:Cloning, Molecular; D004269:DNA, Bacterial / Q000737:chemistry; D016521:Electrophoresis, Gel, Pulsed-Field; D004783:Environmental Microbiology; D036781:Fimbriae Proteins; D005408:Flagellin / Q000235:genetics*; D014644:Genetic Variation; D005838:Genotype; D006801:Humans; D008554:Melioidosis / Q000382:microbiology*; D008969:Molecular Sequence Data; D016133:Polymerase Chain Reaction; D012150:Polymorphism, Restriction Fragment Length; D016415:Sequence Alignment
chemical_list: D001425:Bacterial Outer Membrane Proteins; D004269:DNA, Bacterial; D005408:Flagellin; D036781:Fimbriae Proteins