title: Temperature, template topology, and factor requirements of archaeal transcription.
abstract: Although Archaea are prokaryotic and resemble Bacteria morphologically, their transcription apparatus is remarkably similar to those of eukaryotic cell nuclei. Because some Archaea exist in environments with temperatures of around 100 degreesC, they are likely to have evolved unique strategies for transcriptional control. Here, we investigate the effects of temperature and DNA template topology in a thermophilic archaeal transcription system. Significantly, and in marked contrast with characterized eucaryal systems, archaeal DNA template topology has negligible effect on transcription levels at physiological temperatures using highly purified polymerase and recombinant transcription factors. Furthermore, archaeal transcription does not require hydrolysis of the beta-gamma phosphoanhydride bond of ATP. However, at lower temperatures, negatively supercoiled templates are transcribed more highly than those that are positively supercoiled. Notably, the block to transcription on positively supercoiled templates at lowered temperatures is at the level of polymerase binding and promoter opening. These data imply that Archaea do not possess a functional homologue of transcription factor TFIIH, and that for the promoters studied, transcription is mediated by TATA box-binding protein, transcription factor TFB, and RNA polymerase alone. Furthermore, they suggest that the reduction of plasmid linking number by hyperthermophilic Archaea in vivo in response to cold shock is a mechanism to maintain gene expression under these adverse circumstances.
authors.affiliation: Wellcome Trust/Cancer Research Campaign Institute of Cancer and Developmental Biology, and Department of Zoology Cambridge University, Tennis Court Road, Cambridge CB2 1QR United Kingdom.
authors.forename: S D
authors.initials: SD
authors.lastname: Bell
authors.forename: C
authors.initials: C
authors.lastname: Jaxel
authors.forename: M
authors.initials: M
authors.lastname: Nadal
authors.forename: P F
authors.initials: PF
authors.lastname: Kosa
authors.forename: S P
authors.initials: SP
authors.lastname: Jackson
mesh_terms: D001105:Archaea / Q000235:genetics* / Q000378:metabolism; D001483:Base Sequence; D018983:DNA Footprinting; D004278:DNA, Superhelical / Q000235:genetics; D004268:DNA-Binding Proteins / Q000378:metabolism*; D003850:Deoxyribonuclease I; D010957:Plasmids; D011401:Promoter Regions, Genetic; D016944:Sulfolobus / Q000235:genetics* / Q000378:metabolism; D016385:TATA Box; D035181:TATA-Box Binding Protein; D013696:Temperature; D013698:Templates, Genetic; D051758:Transcription Factor TFIIH; D014157:Transcription Factors / Q000378:metabolism; D019473:Transcription Factors, TFII; D014158:Transcription, Genetic
chemical_list: D004278:DNA, Superhelical; D004268:DNA-Binding Proteins; D035181:TATA-Box Binding Protein; D014157:Transcription Factors; D019473:Transcription Factors, TFII; D051758:Transcription Factor TFIIH; D003850:Deoxyribonuclease I