title: A novel isoform of platelet glycoprotein Ib alpha is prevalent in African Americans.
abstract: The heavy chain of platelet glycoprotein Ib (GPIb) contains two prevalent sequence polymorphisms. The first, Thr/Met145 is responsible for the human platelet alloantigen system, human platelet antigen (HPA)-2. The second is a tandem repeat polymorphism that consists of four variants, A, B, C, and D. Previous linkage studies in Caucasian and Eastern Asian populations have demonstrated that HPA-2a (Thr145) is associated with variants C and D, while HPA-2b (Met145) is associated with variants A and B. We have determined HPA-2 and variable number of tandem repeats (VNTR) genotypes in three different North American ethnic groups. The gene frequency of HPA-2b in the North American Indians was intermediate between African Americans and Caucasians, and similar to the frequency previously reported in Japanese. Furthermore, the VNTR-A allele, which previously has been reported only in Eastern Asian populations, was present in two of 101 North American Indian individuals. These data are consistent with the hypothesis that the first Native Americans migrated to North America from Eastern Asia. Analysis of HPA-2 and VNTR haplotypes demonstrated an unexpected linkage pattern in the African American population. A rare GPIb alpha isoform, HPA-2b/VNTR-C, was present in 2.2% of African American haplotypes. Furthermore, a novel GPIb alpha isoform, HPA-2a/VNTR-B, was present in 6.5% of African American haplotypes. These data suggest a more complex evolutionary pattern of GPIb alpha isoforms than previously proposed.
authors.affiliation: Puget Sound Blood Center, University of Washington, Seattle 98104-1256, USA.
authors.forename: K M
authors.initials: KM
authors.lastname: Aramaki
authors.forename: A P
authors.initials: AP
authors.lastname: Reiner
mesh_terms: D000483:Alleles; D016824:Antigens, Human Platelet / Q000235:genetics; D044466:Asian People / Q000235:genetics; D044383:Black People / Q000235:genetics*; D005787:Gene Frequency; D008040:Genetic Linkage; D005838:Genotype; D006801:Humans; D018598:Minisatellite Repeats / Q000235:genetics; D019038:Platelet Glycoprotein GPIb-IX Complex / Q000235:genetics*; D020033:Protein Isoforms / Q000235:genetics; D014861:Washington; D044465:White People / Q000235:genetics; D001741:Black or African American
chemical_list: C115212:2a alloantigen, human; D016824:Antigens, Human Platelet; D019038:Platelet Glycoprotein GPIb-IX Complex; D020033:Protein Isoforms