Synthesis and hybridization property of an oligonucleotide containing a 3-thioformacetal linked pentathymidylate.
A pentathymidylate fully substituted with 3'-thioformacetal intemucleotidic linkages was synthesized and subsequently incorporated into an oligonucleotide (ON) 15mer. Tm analysis was performed on the resulting ON hybridized with its complementary RNA. This duplex demonstrated slightly improved binding affinity relative to the control phosphate diester ON/RNA hybrid.
Zhang
J
J
Gilead Sciences, Inc., Foster City CA 94404, USA.
Shaw
J T
JT
Matteucci
M D
MD
D000080:Acetals / Q000737:chemistry*; D001483:Base Sequence; D009693:Nucleic Acid Hybridization; D012313:RNA / Q000378:metabolism; D013440:Sulfides / Q000737:chemistry*; D013942:Thymine Nucleotides / Q000138:chemical synthesis* / Q000737:chemistry / Q000378:metabolism
D000080:Acetals; D013440:Sulfides; D013942:Thymine Nucleotides; D012313:RNA