title: Gp120 sequence variation in brain and in T-lymphocyte human immunodeficiency virus type 1 primary isolates.
abstract: OBJECTIVE
  We sought to identify genetic determinants within human immunodeficiency virus type 1 (HIV-1) gp120 that differentiate viral species in brain from those in lymphocytes.
  
  
  METHODS
  Polymerase chain reaction (PCR) was used to amplify gp120 genes from paired brain and T-cell isolates from two infants and two adults with dementia. Amplimers were molecularly cloned and sequenced.
  
  
  RESULTS
  The degrees of amino acid divergence between brain and T-cell clones for the two adults were 7.7% and 8.6% and, for the two infants, 2.4% and 2.7%. For one adult and one infant, divergence was greater among brain cell clones than T-cell clones. In the adults, a 3-amino acid insertion, located similarly within V4 and encoding asparagine residues, was identified in the T-cell clones.
  
  
  CONCLUSIONS
  HIV-1 genetic variation within brain cells is not necessarily restricted compared with that in blood lymphocytes. The species in brain cells can be distinguished from those in lymphocytes by determinants within V4. These differences suggest that immune-mediated selection ongoing within lymphoid cell compartments may not occur within brain.
authors: Department of Neurology, Johns Hopkins University School of Medicine, Baltimore, Maryland, USA.
authors: S
authors: S
authors: Gartner
authors: R A
authors: RA
authors: McDonald
authors: E A
authors: EA
authors: Hunter
authors: F
authors: F
authors: Bouwman
authors: Y
authors: Y
authors: Liu
authors: M
authors: M
authors: Popovic
mesh_terms: D000328:Adult; D000595:Amino Acid Sequence; D001921:Brain / Q000821:virology*; D014644:Genetic Variation; D006031:Glycosylation; D015699:HIV Envelope Protein gp120 / Q000235:genetics*; D015658:HIV Infections / Q000821:virology*; D015497:HIV-1 / Q000145:classification / Q000235:genetics* / Q000276:immunology / Q000302:isolation & purification; D006801:Humans; D007231:Infant, Newborn; D008969:Molecular Sequence Data; D010802:Phylogeny; D011110:Polymorphism, Genetic; D017386:Sequence Homology, Amino Acid; D013601:T-Lymphocytes / Q000821:virology*
chemical_list: D015699:HIV Envelope Protein gp120