title: Genomic studies of the Lucké tumor herpesvirus (RaHV-1).
abstract: Ranid herpesvirus 1 (RaHV-1) is the etiological agent of the Lucké renal adenocarcinoma of the North American leopard frog Rana pipiens. Construction of cosmid libraries containing RaHV-1 DNA inserts allowed the derivation of a BamHI map for the viral genome. Summation of fragment sizes indicates that the genome is 217 kbp in size, a value in accordance with the most recent published estimate (220 kbp) obtained by field-inversion gel electrophoresis. The DNA sequence of the 39,757-bp insert in 1 cosmid (cos54) was determined and was predicted to contain 21 complete and 3 partial genes. In all, 12 genes have distant counterparts in a fish herpesvirus (ictalurid herpesvirus 1) and are present in 2 blocks, 1 of which is relatively inverted. This indicates that RaHV-1 belongs to the fish virus lineage of the herpesvirus family rather than to the lineage populated by mammalian and avian viruses. The remaining 12 genes in cos54 lack counterparts in any other herpesvirus. One of these encodes a putative DNA (cytosine-5) methyltransferase. This raises the possibility that biological processes induced in the host by RaHV-1 might involve methylation of cellular DNA by the viral enzyme.
authors.affiliation: MRC Virology Unit, Glasgow, UK.
authors.forename: A J
authors.initials: AJ
authors.lastname: Davison
authors.forename: W
authors.initials: W
authors.lastname: Sauerbier
authors.forename: A
authors.initials: A
authors.lastname: Dolan
authors.forename: C
authors.initials: C
authors.lastname: Addison
authors.forename: R G
authors.initials: RG
authors.lastname: McKinnell
mesh_terms: D000230:Adenocarcinoma / Q000235:genetics / Q000821:virology; D000595:Amino Acid Sequence; D000818:Animals; D003360:Cosmids; D004273:DNA, Neoplasm / Q000235:genetics; D004279:DNA, Viral / Q000235:genetics; D016679:Genome, Viral; D006566:Herpesviridae Infections / Q000235:genetics / Q000821:virology; D007913:Herpesvirus 1, Ranid / Q000235:genetics*; D007680:Kidney Neoplasms / Q000235:genetics / Q000821:virology; D008969:Molecular Sequence Data; D011894:Rana pipiens; D017386:Sequence Homology, Amino Acid; D014412:Tumor Virus Infections / Q000235:genetics / Q000821:virology
chemical_list: D004273:DNA, Neoplasm; D004279:DNA, Viral