Fish p53 as a possible biomarker for genotoxins in the aquatic environment.
The p53 gene is a tumour suppressor gene which has a fundamental role in cell cycle control and division, and in mammals certain genotoxic agents induce specific mutations in p53, leading to tumourigenesis. Fish have been investigated as models for studying carcinogens, but as yet very little data exists that links exposure to specific chemicals with the aetiology of tumours found in wild populations. In this study, p53 was sequenced from five species of fish with a view to the possible use of mutations in the highly conserved domains of p53 to identify genotoxins in the aquatic environment. A 0.8 kb fragment of the cDNA encompassing the conserved DNA-binding domain of p53 was sequenced in three Oncorhynchus salmonid fish: coho (O. kisutch), chum (O. keta), and chinook (O. tshawytscha) and full-length p53 cDNAs were sequenced in the puffer fish (Tetraodon miurus) and the barbel (Barbus barbus). The full-length puffer fish and barbel p53 cDNAs were 1834 bp and 1790 bp in length, encoding a 367 aa protein and a 369 aa protein, respectively. The deduced aa sequences of the p53 cDNA in the Oncorhynchus salmon shared a 100% identity in the five conserved regions (I-V). Comparisons of the deduced aa sequences for puffer fish and barbel p53 with other fish p53s revealed a high homology within the conserved DNA binding domain (68-86% for puffer fish and between 66-88% for barbel). "Conserved" domain I was not highly conserved in fish, as it is in mammals, and, therefore, conserved domains II-V are most likely to provide the valuable sequences in fish p53 for use in mutational studies to fingerprint genotoxins in the aquatic environment.
Bhaskaran
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A
Fish Physiology Research Group, Brunel University, Department of Biology and Biochemistry, Uxbridge, Middlesex, UK.
May
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D
Rand-Weaver
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M
Tyler
C R
CR
D000595:Amino Acid Sequence; D000818:Animals; D001483:Base Sequence; D003530:Cyprinidae / Q000235:genetics; D004777:Environment; D005399:Fishes / Q000235:genetics*; D016158:Genes, p53 / Q000235:genetics*; D005819:Genetic Markers; D008969:Molecular Sequence Data; D009153:Mutagens / Q000032:analysis*; D017683:Oncorhynchus / Q000235:genetics; D016415:Sequence Alignment; D017422:Sequence Analysis, DNA; D016159:Tumor Suppressor Protein p53 / Q000737:chemistry / Q000235:genetics; D014867:Water
D005819:Genetic Markers; D009153:Mutagens; D016159:Tumor Suppressor Protein p53; D014867:Water