title: Genetic homogeneity, high-resolution mapping, and mutation analysis of the urofacial (Ochoa) syndrome and exclusion of the glutamate oxaloacetate transaminase gene (GOT1) in the critical region as the disease gene.
abstract: The urofacial (Ochoa) syndrome (UFS) is a rare autosomal recessive disorder characterized by abnormal facial expression and urinary abnormalities. Previously, we mapped the gene to a genomic interval of approximately 1 cM on chromosome region 10q23-24, using families from Columbia. Here we demonstrate genetic homogeneity of the syndrome through homozygosity mapping in American patients with Irish heritage. We established a physical map and identified novel polymorphic markers in the UFS critical region. Haplotype analysis using the new markers mapped the UFS gene within one YAC clone of 1,410 kb. We also determined the precise location of the gene encoding for glutamate oxaloacetate transaminase (GOT1) within the new UFS critical region and determined its genomic structure. However, mutation analysis excluded GOT1 as a candidate for the UFS gene.
authors.affiliation: Department of Pathology, Immunology and Laboratory Medicine, Center for Mammalian Genetics, College of Medicine, University of Florida, Gainesville 32610, USA.
authors.forename: C Y
authors.initials: CY
authors.lastname: Wang
authors.forename: Y Q
authors.initials: YQ
authors.lastname: Huang
authors.forename: J D
authors.initials: JD
authors.lastname: Shi
authors.forename: M P
authors.initials: MP
authors.lastname: Marron
authors.forename: Q G
authors.initials: QG
authors.lastname: Ruan
authors.forename: B
authors.initials: B
authors.lastname: Hawkins-Lee
authors.forename: B
authors.initials: B
authors.lastname: Ochoa
authors.forename: J X
authors.initials: JX
authors.lastname: She
mesh_terms: D000015:Abnormalities, Multiple / Q000235:genetics*; D001219:Aspartate Aminotransferases / Q000235:genetics*; D001483:Base Sequence; D002879:Chromosomes, Human, Pair 10 / Q000235:genetics*; D004252:DNA Mutational Analysis; D005091:Exons; D005145:Face / Q000002:abnormalities*; D005808:Genes, Recessive; D006239:Haplotypes; D006720:Homozygote; D006801:Humans; D007438:Introns; D018895:Microsatellite Repeats / Q000235:genetics; D008969:Molecular Sequence Data; D020161:Physical Chromosome Mapping; D020133:Reverse Transcriptase Polymerase Chain Reaction; D017422:Sequence Analysis, DNA; D013577:Syndrome; D014551:Urinary Tract / Q000002:abnormalities*
chemical_list: D001219:Aspartate Aminotransferases