title: Retrovirus integration site Mintb encoding the mouse homolog of hnRNP U.
abstract: Retroviral genes are not usually expressed in mouse embryonal carcinoma (EC) cells, but they are readily expressed upon differentiation of these cells. We previously reported the isolation of EC cell lines that express a neomycin resistance (neo) gene introduced by a recombinant transducing Moloney murine leukemia virus from specific integration sites, Minta, Mintb, Mintc, or Mintd. In some of these clones, the entire 5' long terminal repeat (LTR) was deleted, and the neo gene was expressed by read-through transcription from upstream cellular promoters in a "promoter-trap" fashion. One such promoter ("promoter B" at the Mintb locus) was found in a CpG island, associated with an upstream enhancer ("enhancer B"). Although enhancer B caused expression of the neo gene in the transductant EC cell line, no endogenous transcription from promoter B was detected in the parental EC or NIH3T3 cells. In contrast, we found a strong counter-flow endogenous transcription unit ("R" for reverse), which apparently interfered with transcription from promoter B. Promoter R turned out to have a bidirectional activity in transfection assays. In normal tissues, promoter R activates gene R, which encodes an 800-residue protein that is highly homologous to the rat and human heterogeneous nuclear ribonucleoprotein U (hnRNP U). Northern and in situ hybridization analyses revealed that gene R was abundantly expressed in the testis, especially in the pachytene spermatocytes and round spermatids.
authors.affiliation: Laboratory of Biomedical Genetics, Graduate School of Pharmaceutical Sciences, The University of Tokyo, Tokyo, 113-0033, Japan.
authors.forename: M
authors.initials: M
authors.lastname: Matsui
authors.forename: W C
authors.initials: WC
authors.lastname: Breau
authors.forename: S
authors.initials: S
authors.lastname: Iwasaki
authors.forename: S
authors.initials: S
authors.lastname: Hagiwara
authors.forename: Y
authors.initials: Y
authors.lastname: Tamai
authors.forename: C
authors.initials: C
authors.lastname: Mori
authors.forename: M L
authors.initials: ML
authors.lastname: Bloom
authors.forename: M B
authors.initials: MB
authors.lastname: Jerry
authors.forename: E M
authors.initials: EM
authors.lastname: Eddy
authors.forename: M M
authors.initials: MM
authors.lastname: Taketo
mesh_terms: D016475:3T3 Cells; D000595:Amino Acid Sequence; D000818:Animals; D001483:Base Sequence; D004247:DNA / Q000235:genetics; D004742:Enhancer Elements, Genetic; D034722:Heterogeneous-Nuclear Ribonucleoprotein U; D034441:Heterogeneous-Nuclear Ribonucleoproteins; D006801:Humans; D008297:Male; D051379:Mice; D008969:Molecular Sequence Data; D008979:Moloney murine leukemia virus / Q000235:genetics*; D010957:Plasmids / Q000235:genetics; D011401:Promoter Regions, Genetic; D012333:RNA, Messenger / Q000235:genetics; D051381:Rats; D015183:Restriction Mapping; D012261:Ribonucleoproteins / Q000235:genetics* / Q000378:metabolism; D013737:Testis / Q000378:metabolism; D014162:Transfection; D014407:Tumor Cells, Cultured; D016662:Virus Integration / Q000235:genetics*
chemical_list: D034722:Heterogeneous-Nuclear Ribonucleoprotein U; D034441:Heterogeneous-Nuclear Ribonucleoproteins; D012333:RNA, Messenger; D012261:Ribonucleoproteins; D004247:DNA