title: Metastatic rat carcinoma cells express a new retrotransposon.
abstract: Genes differentially expressed by a rat bladder carcinoma NBT-II cells and their in-vivo-selected metastatic M-NBT-II variant were analysed. Amplification and cloning of a 277-bp B sequence, exclusively expressed by the M-NBT-II cells, were performed, and this sequence was detected as a 6.7-kb RNA. This fragment shares 46-50% identities with the gag-related protein of mouse and hamster Intracisternal A Particles (IAPs). Screening of a M-NBT-II cDNA library with the B probe selected a 1671-bp sequence corresponding to the 5' end of a novel retrotransposon member of the rat IAP family. This sequence has a strong identity with the Ecker Rat IAP (ERA-IAP) except for the B portion and has an open reading frame potentially encoding a 114-amino-acid gag retrovirus-related protein. Rearrangement of this new retrotransposon could be relevant with the tumor progression in our model system since it is only expressed in the M-NBT-II in-vivo-selected carcinoma metastasis.
authors.affiliation: UMR 144, CNRS-Institut Curie, 26 rue d'Ulm, 75248, Paris Cedex 05, France.
authors.forename: M
authors.initials: M
authors.lastname: Grassi
authors.forename: J M
authors.initials: JM
authors.lastname: Girault
authors.forename: W P
authors.initials: WP
authors.lastname: Wang
authors.forename: J P
authors.initials: JP
authors.lastname: Thiery
authors.forename: J
authors.initials: J
authors.lastname: Jouanneau
mesh_terms: D000595:Amino Acid Sequence; D000818:Animals; D001483:Base Sequence; D015139:Blotting, Southern; D003001:Cloning, Molecular; D018076:DNA, Complementary; D015321:Gene Rearrangement; D051379:Mice; D008819:Mice, Nude; D008969:Molecular Sequence Data; D009362:Neoplasm Metastasis; D016366:Open Reading Frames; D051381:Rats; D018626:Retroelements; D012689:Sequence Homology, Nucleic Acid; D014407:Tumor Cells, Cultured; D001749:Urinary Bladder Neoplasms / Q000235:genetics* / Q000473:pathology*
chemical_list: D018076:DNA, Complementary; D018626:Retroelements