title: Transcriptional regulation of the human ADP-ribosylation factor 5 (ARF5) gene.
abstract: Hybridization of a blot containing 50 human RNAs with an ADP-ribosylation factor 5-specific (ARF5) oligonucleotide probe revealed that the ARF5 gene is expressed in all tissues; however, the level of expression varies significantly with highest levels in pancreas, pituitary gland, and placenta. The 5'-flanking region of the human ARF5 gene lacks a TATA or CAAT box and is highly GC-rich. Primer extension analysis indicates that transcription initiates at a discrete site 62 bp 5' to the start of translation; however, the sequence surrounding the transcription initiation site does not resemble the initiator elements described for other TATA-less genes. Transient transfection of ARF5/luciferase deletion constructs into human IMR-32 neuroblastoma cells revealed that sequences within 169 bp of the transcription initiation site were necessary for full expression. Two GC boxes within this region were modified by site-directed mutagenesis and found to be critical for expression of the reporter constructs. Electrophoretic mobility-shift assays demonstrated specific DNA/protein complexes could be formed with oligonucleotides containing each of the GC boxes and these complexes could be effectively competed by oligonucleotides containing either ARF5 Sp1 site or by an oligonucleotide containing a previously characterized Sp1-binding sequence. The level of ARF5 gene expression, therefore, is dependent upon Sp1 or an Sp1-like factor but does not rely upon a canonical initiator element for accurate transcription initiation.
authors.affiliation: Department of Biochemistry and Molecular Biology, University of Arkansas for Medical Sciences, 4301 W. Markham Street, Slot 516, Little Rock, AR 72205-7199, USA.
authors.forename: R A
authors.initials: RA
authors.lastname: Lebeda
authors.forename: S K
authors.initials: SK
authors.lastname: Johnson
authors.forename: R S
authors.initials: RS
authors.lastname: Haun
mesh_terms: D020727:ADP-Ribosylation Factors; D001483:Base Sequence; D002460:Cell Line; D003360:Cosmids; D017931:DNA Primers; D005091:Exons; D019204:GTP-Binding Proteins / Q000235:genetics*; D005786:Gene Expression Regulation; D006801:Humans; D007438:Introns; D008969:Molecular Sequence Data; D010179:Pancreas / Q000378:metabolism; D017354:Point Mutation; D011401:Promoter Regions, Genetic; D016329:Sp1 Transcription Factor / Q000235:genetics*; D014162:Transfection
chemical_list: D017931:DNA Primers; D016329:Sp1 Transcription Factor; D019204:GTP-Binding Proteins; D020727:ADP-Ribosylation Factors