title: TTG as the initiation codon of Salmonella slyA, a gene required for survival within macrophages.
abstract: The slyA gene, which has been implicated in the virulence of Salmonella serovar Typhimurium and its survival in macrophages, is widely distributed among different Salmonella serovars. In this study, we cloned and sequenced the translational initiation region of the slyA gene from nine different serovars and found sequence differences in the previously proposed ATG initiation codon but not in a TTG triplet, another putative initiation codon in the slyA gene. Therefore, we determined the actual translational initiation site of the slyA gene by analyzing slyA genes with defined mutation in either the ATG or TTG sequences in an in vitro translation assay and a quantitative hemolytic assay in Escherichia coli. The replacement of TTG by TTC in the slyA gene significantly reduced both the amount of protein synthesized and the hemolytic activity of a transformed strain of E. coli, while replacement of ATG by ATC had no effect in these assays. In addition, the amino acid sequence analysis of the His-tagged SlyA protein showed that it was identical with the amino acid sequence deduced from the 5' end of the slyA gene with a TTG initiation codon. Our results suggest that TTG serves as the translational initiation codon for the slyA gene of Salmonella.
authors.affiliation: Department of Microbiology, School of Pharmaceutical Sciences, Kitasato University, Tokyo, Japan.
authors.forename: T
authors.initials: T
authors.lastname: Kawakami
authors.forename: A
authors.initials: A
authors.lastname: Kaneko
authors.forename: N
authors.initials: N
authors.lastname: Okada
authors.forename: S
authors.initials: S
authors.lastname: Imajoh-Ohmi
authors.forename: T
authors.initials: T
authors.lastname: Nonaka
authors.forename: H
authors.initials: H
authors.lastname: Matsui
authors.forename: K
authors.initials: K
authors.lastname: Kawahara
authors.forename: H
authors.initials: H
authors.lastname: Danbara
mesh_terms: D000595:Amino Acid Sequence; D000818:Animals; D001426:Bacterial Proteins; D001427:Bacterial Toxins / Q000235:genetics*; D001483:Base Sequence; D003001:Cloning, Molecular; D018387:Codon, Initiator; D004269:DNA, Bacterial; D005798:Genes, Bacterial; D006460:Hemolysin Proteins / Q000235:genetics*; D008264:Macrophages / Q000276:immunology / Q000382:microbiology; D051379:Mice; D008969:Molecular Sequence Data; D016133:Polymerase Chain Reaction; D014176:Protein Biosynthesis; D012475:Salmonella / Q000235:genetics*; D014157:Transcription Factors
chemical_list: D001426:Bacterial Proteins; D001427:Bacterial Toxins; D018387:Codon, Initiator; D004269:DNA, Bacterial; D006460:Hemolysin Proteins; D014157:Transcription Factors; C056785:salmolysin