title: Femtosecond spectroscopic observations of initial intermediates in the photocycle of the photoactive yellow protein from Ectothiorhodospira halophila.
abstract: Femtosecond time-resolved absorbance measurements were used to probe the subpicosecond primary events of the photoactive yellow protein (PYP), a 14-kD soluble photoreceptor from Ectothiorhodospira halophila. Previous picosecond absorption studies from our laboratory have revealed the presence of two new early photochemical intermediates in the PYP photocycle, I(0), which appears in </=3 ps, and I(0)(double dagger), which is formed in 220 ps, as well as stimulated emission from the PYP excited state. In the present study, kinetic measurements at two excitation wavelengths (395 nm and 460 nm) on either side of the PYP absorption maximum (446 nm) were undertaken using 100-fs pump and probe pulses. Global analysis over a range of probe wavelengths yielded time constants of 1.9 ps for the photochemical formation of the I(0) intermediate via the PYP excited state, and 3.4 ps for the repopulation of the ground state from the excited state. In addition to these pathways, 395 nm excitation also initiated an alternative route for PYP excitation and photochemistry, presumably involving a different excited electronic state of the chromophore. No photochemical intermediates formed before I(0) were observed. Based on these data, a quantum yield of 0.5-0.6 for I(0) formation was determined. The structural and mechanistic aspects of these results are discussed.
authors.affiliation: Department of Biochemistry, University of Arizona, Tucson, Arizona 85721, USA.
authors.forename: S
authors.initials: S
authors.lastname: Devanathan
authors.forename: A
authors.initials: A
authors.lastname: Pacheco
authors.forename: L
authors.initials: L
authors.lastname: Ujj
authors.forename: M
authors.initials: M
authors.lastname: Cusanovich
authors.forename: G
authors.initials: G
authors.lastname: Tollin
authors.forename: S
authors.initials: S
authors.lastname: Lin
authors.forename: N
authors.initials: N
authors.lastname: Woodbury
mesh_terms: D001419:Bacteria / Q000737:chemistry* / Q000528:radiation effects*; D001426:Bacterial Proteins / Q000737:chemistry* / Q000528:radiation effects*; D055592:Biophysical Phenomena; D001703:Biophysics; D007700:Kinetics; D008027:Light; D008956:Models, Chemical; D010777:Photochemistry; D020283:Photoreceptors, Microbial / Q000737:chemistry / Q000528:radiation effects; D011994:Recombinant Proteins / Q000737:chemistry / Q000528:radiation effects; D013053:Spectrophotometry
chemical_list: D001426:Bacterial Proteins; D020283:Photoreceptors, Microbial; D011994:Recombinant Proteins; C050162:photoactive yellow protein, Bacteria