title: Abr1, a transposon-like element in the genome of the cultivated mushroom Agaricus bisporus (Lange) Imbach.
abstract: A 300-bp repetitive element was found in the genome of the white button mushroom, Agaricus bisporus, and designated Abr1. It is present in approximately 15 copies per haploid genome in the commercial strain Horst U1. Analysis of seven copies showed 89 to 97% sequence identity. The repeat has features typical of class II transposons (i.e., terminal inverted repeats, subterminal repeats, and a target site duplication of 7 bp). The latter shows a consensus sequence. When used as probe on Southern blots, Abr1 identifies relatively little variation within traditional and present-day commercial strains, indicating that most strains are identical or have a common origin. In contrast to these cultivars, high variation is found among field-collected strains. Furthermore, a remarkable difference in copy numbers of Abr1 was found between A. bisporus isolates with a secondarily homothallic life cycle and those with a heterothallic life cycle. Abr1 is a type II transposon not previously reported in basidiomycetes and appears to be useful for the identification of strains within the species A. bisporus.
authors.affiliation: Mushroom Experimental Station, NL-5960 AA Horst, The Netherlands. Sonnena@PLEX.nl
authors.forename: A S
authors.initials: AS
authors.lastname: Sonnenberg
authors.forename: J J
authors.initials: JJ
authors.lastname: Baars
authors.forename: T S
authors.initials: TS
authors.lastname: Mikosch
authors.forename: P J
authors.initials: PJ
authors.lastname: Schaap
authors.forename: L J
authors.initials: LJ
authors.lastname: Van Griensven
mesh_terms: D000364:Agaricus / Q000145:classification / Q000235:genetics* / Q000254:growth & development; D001483:Base Sequence; D015825:Chromosomes, Fungal / Q000235:genetics; D017931:DNA Primers / Q000235:genetics; D004251:DNA Transposable Elements / Q000235:genetics*; D004271:DNA, Fungal / Q000235:genetics* / Q000302:isolation & purification; D016681:Genome, Fungal; D008969:Molecular Sequence Data
chemical_list: D017931:DNA Primers; D004251:DNA Transposable Elements; D004271:DNA, Fungal