title: Translation of two nested genes in bacteriophage P4 controls immunity-specific transcription termination.
abstract: In phage P4, transcription of the left operon may occur from both the constitutive PLE promoter and the regulated PLL promoter, about 400 nucleotides upstream of PLE. A strong Rho-dependent termination site, timm, is located downstream of both promoters. When P4 immunity is expressed, transcription starting at PLE is efficiently terminated at timm, whereas transcription from PLL is immunity insensitive and reads through timm. We report the identification of two nested genes, kil and eta, located in the P4 left operon. The P4 kil gene, which encodes a 65-amino-acid polypeptide, is the first translated gene downstream of the PLE promoter, and its expression is controlled by P4 immunity. Overexpression of kil causes cell killing. This gene is the terminal part of a longer open reading frame, eta, which begins upstream of PLE. The eta gene is expressed when transcription starts from the PLL promoter. Three likely start codons predict a size between 197 and 199 amino acids for the Eta gene product. Both kil and eta overlap the timm site. By cloning kil upstream of a tRNA reporter gene, we demonstrated that translation of the kil region prevents premature transcription termination at timm. This suggests that P4 immunity might negatively control kil translation, thus enabling transcription termination at timm. Transcription starting from PL proceeds through timm. Mutations that create nonsense codons in eta caused premature termination of transcription starting from PLL. Suppression of the nonsense mutation restored transcription readthrough at timm. Thus, termination of transcription from PLL is prevented by translation of eta.
authors.affiliation: Dipartimento di Genetica e di Biologia dei Microrganismi, Università di Milano, Milan, Italy.
authors.forename: F
authors.initials: F
authors.lastname: Forti
authors.forename: S
authors.initials: S
authors.lastname: Polo
authors.forename: K B
authors.initials: KB
authors.lastname: Lane
authors.forename: E W
authors.initials: EW
authors.lastname: Six
authors.forename: G
authors.initials: G
authors.lastname: Sironi
authors.forename: G
authors.initials: G
authors.lastname: Dehò
authors.forename: D
authors.initials: D
authors.lastname: Ghisotti
mesh_terms: D000595:Amino Acid Sequence; D001483:Base Sequence; D003090:Coliphages / Q000235:genetics*; D004279:DNA, Viral; D004926:Escherichia coli / Q000821:virology; D015967:Gene Expression Regulation, Viral; D005814:Genes, Viral; D008969:Molecular Sequence Data; D016296:Mutagenesis; D016366:Open Reading Frames; D014176:Protein Biosynthesis; D017386:Sequence Homology, Amino Acid; D014158:Transcription, Genetic; D014764:Viral Proteins / Q000096:biosynthesis* / Q000235:genetics
chemical_list: D004279:DNA, Viral; D014764:Viral Proteins; C121560:eta protein, bacteriophage P4; C121561:kil protein, bacteriophage P4