title: Hierarchical order of critical residues on the immunity-determining region of the Im7 protein which confer specific immunity to its cognate colicin.
abstract: The directed mutagenesis study of the Im7 protein of colicin E7 revealed that three residues, D31, D35, and E39, located in the loop 1 and helix 2 regions of the protein were critical for initiating the complex formation with its cognate colicin E7. Interestingly, the importance of these three critical residues in conferring specific immunity to its own colicin was exhibited in a hierarchical order, respectively. Moreover, we found that existence of the three critical residues was common among the DNase-type Im proteins. Most likely the three residues of the DNase-type immunity proteins are critical for initiating the unique protein-protein interactions with their cognate colicin. In addition, replacement of the helix 2 of Im7 by the corresponding region of Im8 produced a phenotype of the mutant protein very similar to that of Im8. This result suggests that the DNase-type Im proteins indeed share a "homologous-structural framework" and evolution of the Im proteins may be engendered by minor amino acid changes in this specific immunity-determining region without causing structural alteration of the proteins.
authors.affiliation: Institute of Biochemistry, National Yang Ming University, Taipei, 11221, Taiwan.
authors.forename: F M
authors.initials: FM
authors.lastname: Lu
authors.forename: H S
authors.initials: HS
authors.lastname: Yuan
authors.forename: Y C
authors.initials: YC
authors.lastname: Hsu
authors.forename: S J
authors.initials: SJ
authors.lastname: Chang
authors.forename: K F
authors.initials: KF
authors.lastname: Chak
mesh_terms: D000595:Amino Acid Sequence; D001426:Bacterial Proteins / Q000737:chemistry / Q000235:genetics / Q000276:immunology*; D001665:Binding Sites; D002942:Circular Dichroism; D003087:Colicins / Q000737:chemistry / Q000276:immunology*; D000939:Epitopes / Q000737:chemistry / Q000276:immunology; D004926:Escherichia coli / Q000276:immunology* / Q000378:metabolism; D007109:Immunity; D008969:Molecular Sequence Data; D016297:Mutagenesis, Site-Directed; D017433:Protein Structure, Secondary; D017386:Sequence Homology, Amino Acid
chemical_list: D001426:Bacterial Proteins; D003087:Colicins; D000939:Epitopes; C007104:colicin immunity proteins