title: Nuclear DEAF-1-related (NUDR) protein contains a novel DNA binding domain and represses transcription of the heterogeneous nuclear ribonucleoprotein A2/B1 promoter.
abstract: Nuclear DEAF-1-related (NUDR) protein is a novel transcriptional regulator with sequence similarity to developmental and oncogenic proteins. NUDR protein deletions were used to localize the DNA binding domain between amino acids 167 and 368, and site-specific DNA photocross-linking indicated at least two sites of protein-DNA contact within this domain. The DNA binding domain contains a proline-rich region and a region with similarity to a Myc-type helix-loop-helix domain but does not include the zinc finger motif at the C terminus. Deoxyribonuclease I protection assays confirmed the presence of multiple NUDR binding motifs (TTC(C/G)G) in the heterogeneous nuclear ribonucleoprotein A2/B1 (hnRNP A2/B1) promoter and also in the 5'-untranslated region (UTR) of hNUDR cDNA. NUDR produced a 65-70% repression of the hnRNP A2/B1 promoter activity, and NUDR binding motifs in the 5'-UTR were found to mediate this repression. NUDR-dependent repression was also observed when the 5'-UTR of NUDR was placed onto a heterologous thymidine kinase promoter in an analogous 5'-UTR position but not when placed upstream of transcription initiation. These results suggest that NUDR may regulate the in vivo expression of hnRNP A2/B1 and NUDR genes and imply that inactivation of NUDR could contribute to the overexpression of hnRNP A2/B1 observed in some human cancers.
authors.affiliation: Department of Physiology, Southern Illinois University School of Medicine, Carbondale, Illinois 62901-6523, USA.
authors.forename: R J
authors.initials: RJ
authors.lastname: Michelson
authors.forename: M W
authors.initials: MW
authors.lastname: Collard
authors.forename: A J
authors.initials: AJ
authors.lastname: Ziemba
authors.forename: J
authors.initials: J
authors.lastname: Persinger
authors.forename: B
authors.initials: B
authors.lastname: Bartholomew
authors.forename: J I
authors.initials: JI
authors.lastname: Huggenvik
mesh_terms: D020121:5' Untranslated Regions / Q000235:genetics; D001483:Base Sequence; D001665:Binding Sites; D004268:DNA-Binding Proteins / Q000235:genetics* / Q000378:metabolism; D005786:Gene Expression Regulation; D018257:Helix-Loop-Helix Motifs; D034481:Heterogeneous-Nuclear Ribonucleoprotein Group A-B; D006801:Humans; D008969:Molecular Sequence Data; D009369:Neoplasms / Q000235:genetics; D009687:Nuclear Proteins / Q000235:genetics / Q000378:metabolism*; D011392:Proline; D011401:Promoter Regions, Genetic; D012097:Repressor Proteins / Q000737:chemistry / Q000378:metabolism; D013937:Thymidine Kinase / Q000235:genetics; D014157:Transcription Factors; D014158:Transcription, Genetic
chemical_list: D020121:5' Untranslated Regions; C116013:DEAF1 protein, human; D004268:DNA-Binding Proteins; D034481:Heterogeneous-Nuclear Ribonucleoprotein Group A-B; D009687:Nuclear Proteins; D012097:Repressor Proteins; D014157:Transcription Factors; D011392:Proline; D013937:Thymidine Kinase