Update of AMmtDB: a database of multi-aligned metazoa mitochondrial DNA sequences.
The AMmtDB database (http://bio-www.ba.cnr.it:8000/srs6/ ) has been updated by collecting the multi-aligned sequences of Chordata mitochondrial genes coding for proteins and tRNAs. The genes coding for proteins are multi-aligned based on the translated sequences and both the nucleotide and amino acid multi-alignments are provided. AMmtDB data selected through SRS can be viewed and managed using GeneDoc or other programs for the management of multi-aligned data depending on the user's operative system. The multiple alignments have been produced with CLUSTALW and PILEUP programs and then carefully optimized manually.
Lanave
C
C
Centro di Studio sui Mitocondri e Metabolismo Energetico CNR, Via Amendola 165/A, 70126 Bari, Italy. cecilia@area.ba.cnr.it
Liuni
S
S
Licciulli
F
F
Attimonelli
M
M
D000818:Animals; D002816:Chordata, Nonvertebrate / Q000235:genetics*; D004272:DNA, Mitochondrial / Q000235:genetics*; D016208:Databases, Factual; D020407:Internet; D016415:Sequence Alignment
D004272:DNA, Mitochondrial