title: Genomic organization and promoter activity of embigin, a member of the immunoglobulin superfamily.
abstract: Embigin is a transmembrane glycoprotein belonging to the immunoglobulin superfamily, which is preferentially expressed in early stages of mouse embryogenesis and enhances integrin-mediated cell-substratum adhesion. The mouse embigin gene, which we cloned, spanned more than 50kb, in which nine exons were present. All exons contained protein-coding sequences. Each of the two immunoglobulin domains was encoded by two exons, and the C-proximal half of the second immunoglobulin domain and the transmembrane domain were in the same exon. These features are shared by the basigin gene; together with protein sequence homology, our results defined a family in the immunoglobulin superfamily, to which embigin and basigin both belong. The major transcriptional initiation site of embigin gene was 103 bases upstream from the translation initiation site, as determined by 5' rapid amplification of cDNA ends. A 3kb DNA fragment upstream from the transcriptional initiation site contained three Sp1 binding sites and had a promoter sequence capable of expressing the downstream gene not only in F9 embryonal carcinoma cells which express the gene, but also in L and G401 cells which do not, indicating the presence of a regulatory region outside the 3kb DNA region. Deletion analysis of the 3.5kb DNA fragment revealed that the region between -125 to +1, containing a single Sp1 binding site, is essential for transcription of the embigin gene.
authors.affiliation: Department of Biochemistry, Nagoya University School of Medicine, 65 Tsurumai-cho, Showa-ku, Nagoya, Japan.
authors.forename: H
authors.initials: H
authors.lastname: Tachikui
authors.forename: N
authors.initials: N
authors.lastname: Kurosawa
authors.forename: K
authors.initials: K
authors.lastname: Kadomatsu
authors.forename: T
authors.initials: T
authors.lastname: Muramatsu
mesh_terms: D000595:Amino Acid Sequence; D000818:Animals; D001483:Base Sequence; D004247:DNA / Q000737:chemistry / Q000235:genetics; D005091:Exons; D005796:Genes / Q000235:genetics*; D006023:Glycoproteins / Q000235:genetics*; D006801:Humans; D007136:Immunoglobulins / Q000235:genetics*; D007438:Introns; D007739:L Cells; D008156:Luciferases / Q000235:genetics / Q000378:metabolism; D008562:Membrane Glycoproteins; D051379:Mice; D008815:Mice, Inbred Strains; D018832:Molecular Chaperones; D008969:Molecular Sequence Data; D011401:Promoter Regions, Genetic / Q000235:genetics*; D011993:Recombinant Fusion Proteins / Q000235:genetics / Q000378:metabolism; D016415:Sequence Alignment; D017422:Sequence Analysis, DNA; D017384:Sequence Deletion; D017386:Sequence Homology, Amino Acid; D014158:Transcription, Genetic; D014162:Transfection; D014407:Tumor Cells, Cultured
chemical_list: C069503:EMB protein, human; D006023:Glycoproteins; D007136:Immunoglobulins; D008562:Membrane Glycoproteins; D018832:Molecular Chaperones; D011993:Recombinant Fusion Proteins; D004247:DNA; D008156:Luciferases