title: Identification and transcription control of fission yeast genes repressed by an ammonium starvation growth arrest.
abstract: In fission yeast Schizosaccharomyces pombe, ammonium starvation induces a growth arrest, a cell cycle exit in G(1) and a further switch to meiosis. This process is regulated by the cAMP-dependent protein kinase and the Wis1-dependent MAP kinase cascade, and downstream transcription factors. In order to understand how cells adapt their genetic programme to the switch from mitotic cycling to starvation, a differential transcript analysis comparing mRNA from exponentially growing and ammonium-starved cells was performed. Genes repressed by this stimulus mainly concern cell growth, i.e. protein synthesis and global metabolism. Comparison of the expression of two of them, the ribosomal proteins Rps6 and TCTP, in many different growing conditions, evidenced a strong correlation, suggesting that their transcriptions are coordinately regulated. Nevertheless, by repeating the ammonium starvation on strains constitutively activated for the PKA pathway (Deltacgs1), or unable to activate the Wis1-dependent MAP kinase pathway (Deltawis1), or with both characteristics (Deltacgs1+Deltawis1), the transcriptional inhibition was found to be governed either by the PKA pathway, or by the Wis1 pathway, or by both. These results suggest that during the switch from exponential growth to ammonium starvation, cell homeostasis is maintained by downregulating the transcription of the most expressed genes by a PKA and a Wis1-dependent process. Accession Nos for the S30 and L14 ribosomal protein cDNA sequences are AJ2731 and AJ2732, respectively.
authors.affiliation: Laboratoire Arago, UMR 7628 du CNRS, Université Pierre et Marie Curie, B.P. 44, F-66651 Banyuls sur Mer, France.
authors.forename: C
authors.initials: C
authors.lastname: Bonnet
authors.forename: E
authors.initials: E
authors.lastname: Perret
authors.forename: X
authors.initials: X
authors.lastname: Dumont
authors.forename: A
authors.initials: A
authors.lastname: Picard
authors.forename: D
authors.initials: D
authors.lastname: Caput
authors.forename: G
authors.initials: G
authors.lastname: Lenaers
mesh_terms: D014408:Biomarkers, Tumor; D002135:Calcium-Binding Proteins / Q000235:genetics; D017868:Cyclic AMP-Dependent Protein Kinases / Q000502:physiology; D005947:Glucose / Q000378:metabolism; D020929:Mitogen-Activated Protein Kinase Kinases; D017346:Protein Serine-Threonine Kinases / Q000502:physiology; D000644:Quaternary Ammonium Compounds / Q000378:metabolism*; D012333:RNA, Messenger / Q000032:analysis; D038601:Ribosomal Protein S6; D012269:Ribosomal Proteins / Q000235:genetics; D012568:Schizosaccharomyces / Q000235:genetics*; D029702:Schizosaccharomyces pombe Proteins; D014158:Transcription, Genetic; D000090324:Tumor Protein, Translationally-Controlled 1
chemical_list: D014408:Biomarkers, Tumor; D002135:Calcium-Binding Proteins; D000644:Quaternary Ammonium Compounds; D012333:RNA, Messenger; D038601:Ribosomal Protein S6; D012269:Ribosomal Proteins; D029702:Schizosaccharomyces pombe Proteins; D000090324:Tumor Protein, Translationally-Controlled 1; D017346:Protein Serine-Threonine Kinases; D017868:Cyclic AMP-Dependent Protein Kinases; D020929:Mitogen-Activated Protein Kinase Kinases; C072068:wis1 protein, S pombe; D005947:Glucose