title: Carboxyl groups and tryptophan residues in the active site of Rhizopus niveus glucoamylase.
abstract: Functionally important carboxyl groups in the glucoamylase, Gluc1, from Rhizopus niveus were investigated by site-specific modification using water-soluble carbodiimide, 1-ethyl-3-(3-dimethyl-aminopropyl)-carbodiimide, and nucleophiles. A total of 7.5 carboxyl groups of the 37 present in Gluc1 were substituted in the presence of the substrate maltose, and there was a slight loss of enzymatic activity. After removal of maltose, re-treatment of the deprotected enzyme reduced its activity to 3% with the modification of 1.2 carboxyl groups. It is conceivable that there is only one carboxyl group located in the active site. Fluorescence spectra of the enzyme suggested an interaction of tryptophan residues and carboxyl groups at the locus of the enzyme active site. Distinctive disruption of the protein structure in the modified enzyme was excluded by CD spectroscopy and immunological investigation.
authors.affiliation: Department of Biomolecular Science, Faculty of Science, Toho University, Chiba, Japan. inokuchi@biomol.sci.toho-u.ac.jp
authors.forename: R
authors.initials: R
authors.lastname: Inokuchi
mesh_terms: D001665:Binding Sites; D002234:Carbodiimides / Q000737:chemistry; D002942:Circular Dichroism; D004789:Enzyme Activation; D005087:Glucan 1,4-alpha-Glucosidase / Q000737:chemistry* / Q000276:immunology / Q000302:isolation & purification / Q000378:metabolism; D006863:Hydrogen-Ion Concentration; D005779:Immunodiffusion; D007700:Kinetics; D008024:Ligands; D012233:Rhizopus / Q000201:enzymology*; D014364:Tryptophan / Q000737:chemistry*
chemical_list: D002234:Carbodiimides; D008024:Ligands; D014364:Tryptophan; D005087:Glucan 1,4-alpha-Glucosidase