Low dielectric response in enzyme active site.
The kinetics of charge transfer depend crucially on the dielectric reorganization of the medium. In enzymatic reactions that involve charge transfer, atomic dielectric response of the active site and of its surroundings determines the efficiency of the protein as a catalyst. We report direct spectroscopic measurements of the reorganization energy associated with the dielectric response in the active site of alpha-chymotrypsin. A chromophoric inhibitor of the enzyme is used as a spectroscopic probe. We find that water strongly affects the dielectric reorganization in the active site of the enzyme in solution. The reorganization energy of the protein matrix in the vicinity of the active site is similar to that of low-polarity solvents. Surprisingly, water exhibits an anomalously high dielectric response that cannot be described in terms of the dielectric continuum theory. As a result, sequestering the active site from the aqueous environment inside low-dielectric enzyme body dramatically reduces the dielectric reorganization. This reduction is particularly important for controlling the rate of enzymatic reactions.
Mertz
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Laboratory of Physical and Structural Biology, National Institute of Child Health and Human Development, National Institutes of Health, Building 9, Room 1E-122, 9000 Rockville Pike, Bethesda, MD 20892-0924, USA.
Krishtalik
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D001665:Binding Sites; D002918:Chymotrypsin / Q000737:chemistry*; D004563:Electrochemistry; D008958:Models, Molecular; D011370:Proflavine / Q000737:chemistry; D012996:Solutions
D012996:Solutions; D011370:Proflavine; D002918:Chymotrypsin; C117608:alpha-chymotrypsin