title: GABA(A) receptor assembly. Identification and structure of gamma(2) sequences forming the intersubunit contacts with alpha(1) and beta(3) subunits.
abstract: GABA(A) receptors are ligand-gated chloride channels composed of five homologous subunits that specifically recognize one another and assemble around an aqueous pore. To identify domains responsible for the specificity of subunit association, we constructed C-terminal truncated gamma(2) subunits, as well as mutated and chimeric fragments. From their ability to interfere with alpha(1)beta(3)gamma(2) receptor assembly and to associate with full-length subunits, we concluded that amino acid sequences gamma(2)-(91-104) and gamma(2)-(83-90) form the sites mediating assembly with alpha(1) and beta(3) subunits, respectively. Neural network-based secondary structure prediction, Monte Carlo optimization, and hydrophobicity analysis led to the conclusion that these sites also form the intersubunit contacts in the completely assembled receptor and provided important information on the benzodiazepine-binding site and structure of GABA(A) receptors.
authors.affiliation: Section of Biochemical Psychiatry, University Clinic for Psychiatry, A-1090 Vienna, Austria.
authors.forename: T
authors.initials: T
authors.lastname: Klausberger
authors.forename: K
authors.initials: K
authors.lastname: Fuchs
authors.forename: B
authors.initials: B
authors.lastname: Mayer
authors.forename: N
authors.initials: N
authors.lastname: Ehya
authors.forename: W
authors.initials: W
authors.lastname: Sieghart
mesh_terms: D000818:Animals; D001483:Base Sequence; D001665:Binding Sites; D018118:Chloride Channels / Q000235:genetics / Q000378:metabolism*; D003001:Cloning, Molecular; D008958:Models, Molecular; D008969:Molecular Sequence Data; D010446:Peptide Fragments / Q000235:genetics / Q000378:metabolism; D011485:Protein Binding; D020836:Protein Structure, Quaternary; D017433:Protein Structure, Secondary; D051381:Rats; D011963:Receptors, GABA-A / Q000235:genetics / Q000378:metabolism*; D011993:Recombinant Fusion Proteins / Q000378:metabolism
chemical_list: D018118:Chloride Channels; D010446:Peptide Fragments; D011963:Receptors, GABA-A; D011993:Recombinant Fusion Proteins