Determination of rate constants for the reaction of hydroxyl radicals with some purines and pyrimidines using sunlight.
Sunlight mediated hydroxyl radical production from aqueous ferric perchlorate at low pH has been investigated using deoxyribose-thiobarbituric acid assay. The rate of production of hydroxyl radical was found to be dependent on the time of irradiation. Hydroxyl radical scavengers can compete with deoxyribose for hydroxyl radicals produced in the system leading to a decreased yield of thiobarbituric acid chromogen. The second-order rate constants of the added scavengers can be determined using a simple competition kinetic method. The rate constants for the reaction of hydroxyl radical with a number of purine and pyrimidine derivatives were determined using this method. The rate constants obtained (1-7 x 10(9) dm(3) mol(-1) s(-1)) were found to be in good agreement with those reported using pulse radiolysis technique. The rate constants of dimethyluracil, xanthosine, amino and methyl substituted pyrimidines, cytidine monophosphate and uridine monophosphate were also determined by this method. It is proposed that sunlight mediated production of hydroxyl radical coupled with deoxyribose-thiobarbituric acid assay is a simple and efficient method for the determination of rate constants for the reaction of hydroxyl radical with a wide range of biomolecules.
Joseph
J M
JM
School of Chemical Sciences, Mahatma Gandhi University, Kerala, India.
Aravindakumar
C T
CT
D002625:Chemistry, Organic / Q000379:methods; D003855:Deoxyribose; D005290:Ferric Compounds / Q000737:chemistry / Q000528:radiation effects; D006863:Hydrogen-Ion Concentration; D017665:Hydroxyl Radical / Q000737:chemistry*; D007700:Kinetics; D010472:Perchlorates / Q000737:chemistry / Q000528:radiation effects; D011687:Purines / Q000737:chemistry*; D011743:Pyrimidines / Q000737:chemistry*; D013472:Sunlight; D017392:Thiobarbituric Acid Reactive Substances
D005290:Ferric Compounds; D010472:Perchlorates; D011687:Purines; D011743:Pyrimidines; D017392:Thiobarbituric Acid Reactive Substances; C001473:iron perchlorate; D017665:Hydroxyl Radical; D003855:Deoxyribose