title: Identification and characterization of beta V spectrin, a mammalian ortholog of Drosophila beta H spectrin.
abstract: Four mammalian beta-spectrin genes are currently recognized, all encode proteins of approximately 240-280,000 M(r) and display 17 triple helical homologous approximately 106-residue repeat units. In Drosophila and Caenorhabditis elegans, a variant beta spectrin with unusual properties has been recognized. Termed beta heavy (beta(H)), this spectrin contains 30 spectrin repeats, has a molecular weight in excess of 400,000, and associates with the apical domain of polarized epithelia. We have cloned and characterized from a human retina cDNA library a mammalian ortholog of Drosophila beta(H) spectrin, and in accord with standard spectrin naming conventions we term this new mammalian spectrin beta 5 (betaV). The gene for human betaV spectrin (HUBSPECV) is on chromosome 15q21. The 11, 722-nucleotide cDNA of betaV spectrin is generated from 68 exons and is predicted to encode a protein with a molecular weight of 416,960. Like its fly counterpart, the derived amino acid sequence of this unusual mammalian spectrin displays 30 spectrin repeats, a modestly conserved actin-binding domain, a conserved membrane association domain 1, a conserved self-association domain, and a pleckstrin homology domain near its COOH terminus. Its putative ankyrin-binding domain is poorly conserved and may be inactive. These structural features suggest that betaV spectrin is likely to form heterodimers and oligomers with alpha spectrin and to interact directly with cellular membranes. Unlike its Drosophila ortholog, betaV spectrin does not contain an SH3 domain but displays in repeat 5 a 45-residue insertion that displays 42% identity to amino acids 85-115 of the E4 protein of type 75 human papilloma virus. Human betaV spectrin is expressed at low levels in many tissues. By indirect immunofluorescence, it is detected prominently in the outer segments of photoreceptor rods and cones and in the basolateral membrane and cytosol of gastric epithelial cells. Unlike its Drosophila ortholog, a distinct apical distribution of betaV spectrin is inapparent in the epithelial cell populations examined, although it is confined to the outer segments of photoreceptor cells. The complete cDNA sequence of human betaV spectrin is available from GenBank(TM) as accession number.
authors.affiliation: Department of Pathology and the Department of Molecular, Cellular, and Developmental Biology, Yale University, New Haven, Connecticut 06510, USA.
authors.forename: P R
authors.initials: PR
authors.lastname: Stabach
authors.forename: J S
authors.initials: JS
authors.lastname: Morrow
mesh_terms: D000595:Amino Acid Sequence; D000818:Animals; D001483:Base Sequence; D017173:Caenorhabditis elegans; D003001:Cloning, Molecular; D016384:Consensus Sequence; D018076:DNA, Complementary; D004330:Drosophila; D029721:Drosophila Proteins; D005091:Exons; D015723:Gene Library; D006801:Humans; D007438:Introns; D008322:Mammals; D008969:Molecular Sequence Data; D008970:Molecular Weight; D009928:Organ Specificity; D010802:Phylogeny; D051381:Rats; D011994:Recombinant Proteins / Q000737:chemistry; D020449:Repetitive Sequences, Amino Acid; D012160:Retina / Q000378:metabolism; D016415:Sequence Alignment; D017386:Sequence Homology, Amino Acid; D013049:Spectrin / Q000737:chemistry*; D014407:Tumor Cells, Cultured; D014764:Viral Proteins / Q000737:chemistry
chemical_list: D018076:DNA, Complementary; D029721:Drosophila Proteins; D011994:Recombinant Proteins; D014764:Viral Proteins; C112961:kst protein, Drosophila; D013049:Spectrin