Molecular confirmation of a Trichophyton violaceum isolate from human black-dot ringworm.
A clinical isolate from a black-dot ringworm lesion of a 28-year-old female Japanese was investigated by morphological and biochemical analyses as well as molecular analyses. The isolate grew well on thiamine enriched agar and did not produce violet pigment, macro-conidia or micro-conidia on Sabouraud's dextrose agar. Approximately 620-bp genomic DNA fragments of the CHS1 gene were amplified from Trichophyton mentagrophytes, T. rubrum, T. tonsurans and T. violaceum by polymerase chain reaction (PCR) and sequenced. The chitin synthase 1 (CHS1) nucleotide sequences of the clinical isolate showed more than 97% similarity to that of T. violaceum and less than 96% similarity to that of T. mentagrophytes, T. rubrum and T. tonsurans. The phylogenetic analysis of their sequences revealed that the clinical isolate was genetically close to T. violaceum and distinct from T. mentagrophytes, T. rubrum and T. tonsurans. Therefore, the isolate was confirmed as T. violaceum by mycological examination and molecular analyses.
Okabayashi
K
K
Department of Dermatology, Teikyo University School of Medicine, Tokyo, Japan.
Kano
R
R
Nakamura
Y
Y
Ooka
S
S
Kashima
M
M
Mizoguchi
M
M
Watanabe
S
S
Hasegawa
A
A
D000328:Adult; D002687:Chitin Synthase / Q000235:genetics; D004271:DNA, Fungal / Q000737:chemistry / Q000235:genetics; D005260:Female; D005800:Genes, Fungal; D006801:Humans; D008969:Molecular Sequence Data; D010802:Phylogeny; D016133:Polymerase Chain Reaction; D014005:Tinea / Q000382:microbiology*; D014249:Trichophyton / Q000145:classification* / Q000201:enzymology / Q000235:genetics* / Q000254:growth & development / Q000302:isolation & purification
D004271:DNA, Fungal; D002687:Chitin Synthase