title: Association of functional microsatellites in the human type I collagen alpha2 chain (COL1A2) gene with systemic sclerosis.
abstract: Systemic sclerosis (SSc) or scleroderma is a generalized disorder of connective tissue. The etiology is poorly understood; however, both genetic and environmental factors have been implicated. To investigate the disease-susceptible gene for SSc, we examined the association of the disease with a gene (COL1A2) for type I collagen, which accumulates excessively in the affected organs. The COL1A2 gene containing a specific combination of the two dinucleotide repeats, repeat-haplotype, is involved in the regulation of gene expression. Homozygotes for a 5'-(CA)13CGCACA(CG)6(CA)8 -(GT)12 -3' were found with significantly higher frequency (P = 0.029, relative risk, RR > 6.93) in SSc patients than in controls, and association was prominent (P = 0.0042, RR > 32.0) in the male patients positive for SSc-specific antinuclear antibodies (ANAs). This repeat-haplotype showed the highest stimulative activity for the transcription of the COL1A2 promoter among the reporter gene constructs tested. The results indicate that a portion of the patients having a specific dinucleotide repeat-haplotype homozygously and expressing the ANAs have a significantly higher risk for SSc than those individuals with other combinations of the repeat-haplotypes.
authors.affiliation: Department of Molecular Pathogenesis, Medical Research Institute, Tokyo Medical and Dental University, Japan. ryuhata@kdcnet.ac.jp
authors.forename: R
authors.initials: R
authors.lastname: Hata
authors.forename: J
authors.initials: J
authors.lastname: Akai
authors.forename: A
authors.initials: A
authors.lastname: Kimura
authors.forename: O
authors.initials: O
authors.lastname: Ishikawa
authors.forename: M
authors.initials: M
authors.lastname: Kuwana
authors.forename: H
authors.initials: H
authors.lastname: Shinkai
mesh_terms: D001483:Base Sequence; D016022:Case-Control Studies; D003094:Collagen / Q000235:genetics*; D017931:DNA Primers / Q000235:genetics; D018900:Dinucleotide Repeats; D005260:Female; D005787:Gene Frequency; D006239:Haplotypes; D006720:Homozygote; D006801:Humans; D008297:Male; D008969:Molecular Sequence Data; D012595:Scleroderma, Systemic / Q000209:etiology / Q000235:genetics*; D014158:Transcription, Genetic
chemical_list: D017931:DNA Primers; D003094:Collagen