Insights into molybdenum cofactor deficiency provided by the crystal structure of the molybdenum cofactor biosynthesis protein MoaC.
BACKGROUND
The molybdenum cofactor (Moco) is an essential component of a large family of enzymes involved in important transformations in carbon, nitrogen and sulfur metabolism. The Moco biosynthetic pathway is evolutionarily conserved and found in archaea, eubacteria and eukaryotes. In humans, genetic deficiencies of enzymes involved in this pathway trigger an autosomal recessive and usually deadly disease with severe neurological symptoms. The MoaC protein, together with the MoaA protein, is involved in the first step of Moco biosynthesis.


RESULTS
MoaC from Escherichia coli has been expressed and purified to homogeneity and its crystal structure determined at 2 A resolution. The enzyme is organized into a tightly packed hexamer with 32 symmetry. The monomer consists of an antiparallel, four-stranded beta sheet packed against two long alpha helices, and its fold belongs to the ferredoxin-like family. Analysis of structural and biochemical data strongly suggests that the active site is located at the interface of two monomers in a pocket that contains several strictly conserved residues.


CONCLUSIONS
Asp128 in the putative active site appears to be important for catalysis as its replacement with alanine almost completely abolishes protein activity. The structure of the Asp128-->Ala variant reveals substantial conformational changes in an adjacent loop. In the human MoaC ortholog, substitution of Thr182 with proline causes Moco deficiency, and the corresponding substitution in MoaC severely compromises activity. This residue is located near the N-terminal end of helix alpha4 at an interface between two monomers. The MoaC structure provides a framework for the analysis of additional dysfunctional mutations in the corresponding human gene.
Wuebbens
M M
MM
Department of Biochemistry, Duke University Medical Center, Durham, NC 27710, USA.
Liu
M T
MT
Rajagopalan
K
K
Schindelin
H
H
D000595:Amino Acid Sequence; D019843:Archaeal Proteins / Q000737:chemistry; D001426:Bacterial Proteins / Q000737:chemistry* / Q000235:genetics / Q000302:isolation & purification / Q000502:physiology; D001665:Binding Sites; D003067:Coenzymes; D018360:Crystallography, X-Ray; D004926:Escherichia coli / Q000201:enzymology; D029968:Escherichia coli Proteins; D019143:Evolution, Molecular; D005288:Ferredoxins / Q000235:genetics; D005796:Genes; D006801:Humans; D008667:Metalloproteins / Q000096:biosynthesis / Q000172:deficiency* / Q000378:metabolism*; D008958:Models, Molecular; D008969:Molecular Sequence Data; D000090006:Molybdenum Cofactors; D005810:Multigene Family; D016297:Mutagenesis, Site-Directed; D010940:Plant Proteins / Q000737:chemistry; D011487:Protein Conformation; D017433:Protein Structure, Secondary; D017434:Protein Structure, Tertiary; D011621:Pteridines / Q000378:metabolism*; D011993:Recombinant Fusion Proteins / Q000737:chemistry; D016415:Sequence Alignment; D017386:Sequence Homology, Amino Acid; D013045:Species Specificity; D013329:Structure-Activity Relationship
D019843:Archaeal Proteins; D001426:Bacterial Proteins; D003067:Coenzymes; D029968:Escherichia coli Proteins; D005288:Ferredoxins; D008667:Metalloproteins; D000090006:Molybdenum Cofactors; D010940:Plant Proteins; D011621:Pteridines; D011993:Recombinant Fusion Proteins; C413929:MoaC protein, E coli; C022261:molybdopterin