Improved in vivo dimethyl sulfate footprinting using AlkA protein: DNA-protein interactions at the mouse H19 gene promoter in primary embryo fibroblasts.
Szabó
P E
PE
Division of Biology, Beckman Research Institute of the City of Hope, Duarte, California 91010, USA. pszabo@coh.org
Pfeifer
G P
GP
Miao
F
F
O'Connor
T R
TR
Mann
J R
JR
D000477:Alkylating Agents / Q000378:metabolism*; D000818:Animals; D001483:Base Sequence; D004247:DNA / Q000378:metabolism*; D018983:DNA Footprinting; D045647:DNA Glycosylases; D003850:Deoxyribonuclease I / Q000378:metabolism; D004622:Embryo, Mammalian / Q000378:metabolism; D005347:Fibroblasts / Q000378:metabolism; D005821:Genetic Techniques; D051379:Mice; D008969:Molecular Sequence Data; D009699:N-Glycosyl Hydrolases / Q000737:chemistry / Q000235:genetics / Q000378:metabolism*; D010880:Piperidines / Q000494:pharmacology; D016133:Polymerase Chain Reaction / Q000379:methods; D011401:Promoter Regions, Genetic; D011485:Protein Binding; D062085:RNA, Long Noncoding; D022661:RNA, Untranslated / Q000378:metabolism; D013463:Sulfuric Acid Esters / Q000378:metabolism*; D014466:Ultraviolet Rays
D000477:Alkylating Agents; C094335:H19 long non-coding RNA; D010880:Piperidines; D062085:RNA, Long Noncoding; D022661:RNA, Untranslated; D013463:Sulfuric Acid Esters; C032727:piperidine; D004247:DNA; D003850:Deoxyribonuclease I; D045647:DNA Glycosylases; D009699:N-Glycosyl Hydrolases; C076131:DNA-3-methyladenine glycosidase II; C007482:dimethyl sulfate