Detection and characterization of genetic recombination in cytopathic type 2 bovine viral diarrhea viruses.
In cytopathic bovine viral diarrhea virus genotype 1 (BVDV1) isolates, insertions are reported at position A (amino acid [aa] 1535) and position B (aa 1589). Insertions at position B predominate. In this survey it was found that in BVDV2, insertions at position A predominate. Possible reasons for this difference in relative frequency are discussed.
Ridpath
J F
JF
Virus and Prion Diseases of Livestock Research Unit, National Animal Disease Center, Agricultural Research Service-U.S. Department of Agriculture, Ames, Iowa 50010, USA. jridpath@nadc.ars.usda
Neill
J D
JD
D000595:Amino Acid Sequence; D000818:Animals; D002417:Cattle; D003588:Cytopathogenic Effect, Viral / Q000235:genetics*; D030241:Diarrhea Virus 1, Bovine Viral / Q000235:genetics*; D030242:Diarrhea Virus 2, Bovine Viral / Q000235:genetics*; D016679:Genome, Viral; D005838:Genotype; D008969:Molecular Sequence Data; D016254:Mutagenesis, Insertional; D010447:Peptide Hydrolases / Q000235:genetics; D010802:Phylogeny; D016133:Polymerase Chain Reaction; D020365:RNA Helicases / Q000235:genetics; D011995:Recombination, Genetic; D016415:Sequence Alignment; D020539:Sequence Analysis, Protein; D017361:Viral Nonstructural Proteins / Q000235:genetics; D012697:Serine Endopeptidases; D043583:Nucleoside-Triphosphatase; D053487:DEAD-box RNA Helicases; D000085242:Viral Proteases
D010447:Peptide Hydrolases; D020365:RNA Helicases; D017361:Viral Nonstructural Proteins; C086730:p80 protein, bovine viral diarrhea virus; D012697:Serine Endopeptidases; D043583:Nucleoside-Triphosphatase; D053487:DEAD-box RNA Helicases; D000085242:Viral Proteases