title: Genetic influence on the structural variations of the abnormal prion protein.
abstract: Prion diseases are characterized by the presence of the abnormal prion protein PrP(Sc), which is believed to be generated by the conversion of the alpha-helical structure that predominates in the normal PrP isoform into a beta-sheet structure resistant to proteinase K (PK). In human prion diseases, two major types of PrP(Sc), type 1 and 2, can be distinguished based on the difference in electrophoretic migration of the PK-resistant core fragment. In this study, protein sequencing was used to identify the PK cleavage sites of PrP(Sc) in 36 cases of prion diseases. We demonstrated two primary cleavage sites at residue 82 and residue 97 for type 1 and type 2 PrP(Sc), respectively, and numerous secondary cleavages distributed along the region spanning residues 74-102. Accordingly, we identify three regions in PrP(Sc): one N-terminal (residues 23-73) that is invariably PK-sensitive, one C-terminal (residues 103-231) that is invariably PK-resistant, and a third variable region (residues 74-102) where the site of the PK cleavage, likely reflecting the extent of the beta-sheet structure, varies mostly as a function of the PrP genotype at codon 129.
authors.affiliation: Institute of Pathology, Case Western Reserve University, Cleveland, OH 44106, USA.
authors.forename: P
authors.initials: P
authors.lastname: Parchi
authors.forename: W
authors.initials: W
authors.lastname: Zou
authors.forename: W
authors.initials: W
authors.lastname: Wang
authors.forename: P
authors.initials: P
authors.lastname: Brown
authors.forename: S
authors.initials: S
authors.lastname: Capellari
authors.forename: B
authors.initials: B
authors.lastname: Ghetti
authors.forename: N
authors.initials: N
authors.lastname: Kopp
authors.forename: W J
authors.initials: WJ
authors.lastname: Schulz-Schaeffer
authors.forename: H A
authors.initials: HA
authors.lastname: Kretzschmar
authors.forename: M W
authors.initials: MW
authors.lastname: Head
authors.forename: J W
authors.initials: JW
authors.lastname: Ironside
authors.forename: P
authors.initials: P
authors.lastname: Gambetti
authors.forename: S G
authors.initials: SG
authors.lastname: Chen
mesh_terms: D001923:Brain Chemistry; D003062:Codon; D007562:Creutzfeldt-Jakob Syndrome / Q000235:genetics*; D019286:Endopeptidase K; D014644:Genetic Variation; D006801:Humans; D007729:Kuru / Q000235:genetics*; D010446:Peptide Fragments / Q000737:chemistry; D018620:PrPSc Proteins / Q000737:chemistry / Q000235:genetics*; D011487:Protein Conformation
chemical_list: D003062:Codon; D010446:Peptide Fragments; D018620:PrPSc Proteins; D019286:Endopeptidase K