title: A methylotrophic pathway participates in pectin utilization by Candida boidinii.
abstract: The methylotrophic yeast Candida boidinii S2 was found to be able to grow on pectin or polygalacturonate as a carbon source. When cells were grown on 1% (wt/vol) pectin, C. boidinii exhibited induced levels of the pectin-depolymerizing enzymes pectin methylesterase (208 mU/mg of protein), pectin lyase (673 mU/mg), pectate lyase (673 mU/mg), and polygalacturonase (3.45 U/mg) and two methanol-metabolizing peroxisomal enzymes, alcohol oxidase (0.26 U/mg) and dihydroxyacetone synthase (94 mU/mg). The numbers of peroxisomes also increased ca. two- to threefold in cells grown on these pectic compounds (3.34 and 2.76 peroxisomes/cell for cells grown on pectin and polygalacturonate, respectively) compared to the numbers in cells grown on glucose (1.29 peroxisomes/cell). The cell density obtained with pectin increased as the degree of methyl esterification of pectic compounds increased, and it decreased in strains from which genes encoding alcohol oxidase and dihydroxyacetone synthase were deleted and in a peroxisome assembly mutant. Our study showed that methanol metabolism and peroxisome assembly play important roles in the degradation of pectin, especially in the utilization of its methyl ester moieties.
authors.affiliation: Department of Food Science and Technology, Faculty of Bioindustry, Tokyo University of Agriculture, 196 Yasaka, Abashiri, Hokkaido 099-2493, Japan. t-nakaga@bioindustry.nodai.ac.jp
authors.forename: T
authors.initials: T
authors.lastname: Nakagawa
authors.forename: T
authors.initials: T
authors.lastname: Miyaji
authors.forename: H
authors.initials: H
authors.lastname: Yurimoto
authors.forename: Y
authors.initials: Y
authors.lastname: Sakai
authors.forename: N
authors.initials: N
authors.lastname: Kato
authors.forename: N
authors.initials: N
authors.lastname: Tomizuka
mesh_terms: D000429:Alcohol Oxidoreductases / Q000235:genetics / Q000378:metabolism; D019880:Aldehyde-Ketone Transferases / Q000235:genetics / Q000378:metabolism; D002175:Candida / Q000235:genetics / Q000254:growth & development / Q000378:metabolism*; D002265:Carboxylic Ester Hydrolases / Q000378:metabolism; D005800:Genes, Fungal; D007700:Kinetics; D000432:Methanol / Q000378:metabolism; D016296:Mutagenesis; D010368:Pectins / Q000378:metabolism*; D020675:Peroxisomes / Q000201:enzymology; D011096:Polygalacturonase / Q000378:metabolism; D011133:Polysaccharide-Lyases / Q000378:metabolism; D013379:Substrate Specificity
chemical_list: D010368:Pectins; D000429:Alcohol Oxidoreductases; C019643:alcohol oxidase; D019880:Aldehyde-Ketone Transferases; C031222:formaldehyde transketolase; D002265:Carboxylic Ester Hydrolases; C022323:pectinesterase; D011096:Polygalacturonase; D011133:Polysaccharide-Lyases; C027349:pectin lyase; C003181:polygalacturonic acid; D000432:Methanol