title: Excluded volume in solvation: sensitivity of scaled-particle theory to solvent size and density.
abstract: Changes in solvent environment greatly affect macromolecular structure and stability. To investigate the role of excluded volume in solvation, scaled-particle theory is often used to calculate delta G(tr)(ev), the excluded-volume portion of the solute transfer free energy, delta G(tr). The inputs to SPT are the solvent radii and molarities. Real molecules are not spheres. Hence, molecular radii are not uniquely defined and vary for any given species. Since delta G(tr)(ev) is extremely sensitive to solvent radii, uncertainty in these radii causes a large uncertainty in delta G(tr)(ev)-several kcal/mol for amino acid solutes transferring from water to aqueous mixtures. This uncertainty is larger than the experimental delta G(tr) values. Also, delta G(tr)(ev) can be either positive or negative. Adding neutral crowding molecules may not necessarily reduce solubility. Lastly, delta G(tr)(ev) is very sensitive to solvent density, rho. A few percent error in rho may even cause qualitative deviations in delta G(tr)(ev). For example, if rho is calculated by assuming the hard-sphere pressure to be constant, then delta G(tr)(ev) values and uncertainties are now only tenths of a kcal/mol and are positive. Because delta G(tr)(ev) values calculated by scaled-particle theory are strongly sensitive to solvent radii and densities, determining the excluded-volume contribution to transfer free energies using SPT may be problematic.
authors.affiliation: Department of Biochemistry, Molecular Biology, and Biophysics, University of Minnesota, Saint Paul, Minnesota 55108-1022, USA.
authors.forename: K E
authors.initials: KE
authors.lastname: Tang
authors.forename: V A
authors.initials: VA
authors.lastname: Bloomfield
mesh_terms: D055592:Biophysical Phenomena; D001703:Biophysics; D000431:Ethanol / Q000737:chemistry; D019855:Ethylene Glycol / Q000737:chemistry; D046911:Macromolecular Substances; D008956:Models, Chemical; D012997:Solvents / Q000737:chemistry*; D013395:Sucrose / Q000737:chemistry; D013816:Thermodynamics; D014508:Urea / Q000737:chemistry
chemical_list: D046911:Macromolecular Substances; D012997:Solvents; D000431:Ethanol; D013395:Sucrose; D014508:Urea; D019855:Ethylene Glycol