title: L-Glutamate dehydrogenase from the antarctic fish Chaenocephalus aceratus. Primary structure, function and thermodynamic characterisation: relationship with cold adaptation.
abstract: In order to study the molecular mechanisms of enzyme cold adaptation, direct amino acid sequence, catalytic features, thermal stability and thermodynamics of the reaction and of heat inactivation of L-glutamate dehydrogenase (GDH) from the liver of the Antarctic fish Chaenocephalus aceratus (suborder Notothenioidei, family Channichthyidae) were investigated. The enzyme shows dual coenzyme specificity, is inhibited by GTP and the forward reaction is activated by ADP and ATP. The complete primary structure of C. aceratus GDH has been established; it is the first amino acid sequence of a fish GDH to be described. In comparison with homologous mesophilic enzymes, the amino acid substitutions suggest a less compact molecular structure with a reduced number of salt bridges. Functional characterisation indicates efficient compensation of Q(10), achieved by increased k(cat) and modulation of S(0.5), which produce a catalytic efficiency at low temperature very similar to that of bovine GDH at its physiological temperature. The structural and functional characteristics are indicative of a high extent of protein flexibility. This property seems to find correspondence in the heat inactivation of Antarctic and bovine enzymes, which are inactivated at very similar temperature, but with different thermodynamics.
authors.affiliation: Institute of Protein Biochemistry and Enzymology, C.N.R., Via Marconi 10, I-80125, Naples, Italy.
authors.forename: M A
authors.initials: MA
authors.lastname: Ciardiello
authors.forename: L
authors.initials: L
authors.lastname: Camardella
authors.forename: V
authors.initials: V
authors.lastname: Carratore
authors.forename: G
authors.initials: G
authors.lastname: di Prisco
mesh_terms: D000064:Acclimatization; D000595:Amino Acid Sequence; D019943:Amino Acid Substitution; D000818:Animals; D000864:Antarctic Regions; D003080:Cold Temperature; D004789:Enzyme Activation; D004795:Enzyme Stability; D005399:Fishes / Q000378:metabolism*; D005969:Glutamate Dehydrogenase / Q000737:chemistry / Q000302:isolation & purification / Q000378:metabolism*; D006863:Hydrogen-Ion Concentration; D007700:Kinetics; D008969:Molecular Sequence Data; D008970:Molecular Weight; D009243:NAD / Q000737:chemistry; D009249:NADP / Q000737:chemistry; D016415:Sequence Alignment; D013816:Thermodynamics
chemical_list: D009243:NAD; D009249:NADP; D005969:Glutamate Dehydrogenase