title: Some efficient methods to correct confocal images for easy interpretation.
abstract: In this paper we have explained some efficient methods to correct artefacts in confocal laser beam scanning microscope (CLSM) images. The main aim is to enhance object features such that they become clearly visible for interactive evaluation and to reduce the overall noise so that the automatic segmentation and feature measurement can be done easily. A simple automatic-thresholding technique, and a straightforward method to restore the light intensity along the depth of the image stack are proposed. Another problem associated with the CLSM is the non-isotropic resolution. We have presented an interpolation technique based on XOR contouring and morphing to virtually insert the image slices in the image stack for improving the axial resolution. This interpolation technique has the merits of both contour- and intensity-based interpolations. Results of application of these methods on CLSM data are shown.
authors.affiliation: Wellcome Trust Centre for Human Genetics, University of Oxford, Oxford, OX3 7BN, UK. umesh.adiga@well.ox.ac.uk
authors.forename: P S
authors.initials: PS
authors.lastname: Umesh Adiga
authors.forename: B B
authors.initials: BB
authors.lastname: Chaudhuri
mesh_terms: D002277:Carcinoma / Q000473:pathology; D006801:Humans; D007091:Image Processing, Computer-Assisted / Q000379:methods*; D008297:Male; D018613:Microscopy, Confocal; D011471:Prostatic Neoplasms / Q000473:pathology