title: Non-erythroid form of acute intermittent porphyria caused by promoter and frameshift mutations distant from the coding sequence of exon 1 of the HMBS gene.
abstract: Acute intermittent porphyria (AIP) is a low-penetrant, autosomal dominant disorder caused by mutations in the HMBS gene. The gene is transcribed from two promoters to produce ubiquitous and erythroid isoforms of porphobilinogen deaminase, which differ only at their NH2 ends. In the classical form of AIP, both isoforms are deficient, but about 5% of families have the non-erythroid variant in which only the ubiquitous isoform is affected. Previously identified mutations in this variant have been within or close to the coding region of exon 1 of the HMBS gene, the only exon that is expressed solely in the ubiquitous isoform. Here, we describe mutations in the ubiquitous promoter (-154delG) and in exon 3 (41delA) that cause the non-erythroid variant. Reporter gene and electrophoretic mobility shift assays show that the G nucleotide at position -154, the most 5' of several transcription-initiation sites in the ubiquitous HMBS promoter, which lies immediately 3' to a transcription-factor IIB binding motif, is essential for normal transcription. The frameshift mutation in exon 3 introduces a stop codon into mRNA for the ubiquitous isoform only. Our investigations identify two new mechanisms for production of the non-erythroid variant of AIP and demonstrate that mutational analysis for diagnosis of this variant needs to include wider regions of the HMBS gene than indicated by previous reports. Furthermore, they show that deletion of one of several transcription initiation sites in the promoter of a housekeeping gene that lacks both TATA and initiator elements can produce disease.
authors.affiliation: Department of Medical Biochemistry, University Hospital of Wales and Llandough Hospital NHS Trust and University of Wales College of Medicine, Cardiff, UK.
authors.forename: S D
authors.initials: SD
authors.lastname: Whatley
authors.forename: A G
authors.initials: AG
authors.lastname: Roberts
authors.forename: D H
authors.initials: DH
authors.lastname: Llewellyn
authors.forename: C P
authors.initials: CP
authors.lastname: Bennett
authors.forename: C
authors.initials: C
authors.lastname: Garrett
authors.forename: G H
authors.initials: GH
authors.lastname: Elder
mesh_terms: D000293:Adolescent; D000328:Adult; D001483:Base Sequence; D001665:Binding Sites; D002675:Child, Preschool; D005091:Exons; D005260:Female; D016368:Frameshift Mutation; D006801:Humans; D011163:Hydroxymethylbilane Synthase / Q000235:genetics*; D008297:Male; D008969:Molecular Sequence Data; D017118:Porphyria, Acute Intermittent / Q000235:genetics*; D017092:Porphyria, Erythropoietic / Q000235:genetics; D011401:Promoter Regions, Genetic; D020033:Protein Isoforms / Q000235:genetics; D035581:Transcription Factor TFIIB; D014157:Transcription Factors / Q000378:metabolism
chemical_list: D020033:Protein Isoforms; D035581:Transcription Factor TFIIB; D014157:Transcription Factors; D011163:Hydroxymethylbilane Synthase