Rotavirus nonstructural protein NSP2 self-assembles into octamers that undergo ligand-induced conformational changes.
The nonstructural protein NSP2 is a component of the rotavirus replication machinery and binds single-stranded RNA cooperatively, with high affinity, and independent of sequence. Recently, NSP2 has been shown to form multimers and to possess an NTPase activity, but its precise function remains unclear. In the present study, we have characterized the solution structure of recombinant NSP2 by velocity and equilibrium ultracentrifugation, dynamic light scattering, and circular dichroism spectroscopy. We found that NSP2 exists as an octamer, which is functional in the binding of RNA and ADP. In the presence of magnesium, a partial dissociation of the octamer into smaller oligomers was observed. This was reversed by binding of ADP and RNA. We observed an increased sedimentation rate in the presence of ADP and a nonhydrolyzable ATP analogue, which suggests a change toward a significantly more compact octameric conformation. The secondary structure of NSP2 showed a high fraction of beta-sheet, with small changes induced by magnesium that were reversed in the presence of RNA. That NSP2 can exist in different conformations lends support to the previously proposed hypothesis (Taraporewala, Z., Chen, D., and Patton, J. T. (1999) J. Virol. 73, 9934-9943) of its function as a molecular motor involved in the packaging of viral mRNA.
Schuck
P
P
Division of Bioengineering and Physical Science, ORS, OD, National Institutes of Health, Bethesda, Maryland 20892, USA.
Taraporewala
Z
Z
McPhie
P
P
Patton
J T
JT
D000244:Adenosine Diphosphate / Q000378:metabolism; D000255:Adenosine Triphosphate / Q000031:analogs & derivatives* / Q000378:metabolism; D002942:Circular Dichroism; D004926:Escherichia coli / Q000378:metabolism; D008024:Ligands; D008027:Light; D008274:Magnesium / Q000494:pharmacology; D015233:Models, Statistical; D011485:Protein Binding / Q000187:drug effects; D011487:Protein Conformation / Q000187:drug effects; D017433:Protein Structure, Secondary; D012313:RNA / Q000378:metabolism; D012333:RNA, Messenger / Q000378:metabolism; D016601:RNA-Binding Proteins / Q000737:chemistry* / Q000378:metabolism*; D011994:Recombinant Proteins / Q000737:chemistry; D012401:Rotavirus / Q000737:chemistry* / Q000378:metabolism*; D012542:Scattering, Radiation; D013816:Thermodynamics; D014461:Ultracentrifugation; D017361:Viral Nonstructural Proteins / Q000737:chemistry* / Q000378:metabolism*; D014867:Water / Q000378:metabolism
D008024:Ligands; D012333:RNA, Messenger; D016601:RNA-Binding Proteins; D011994:Recombinant Proteins; D017361:Viral Nonstructural Proteins; D014867:Water; C079234:NS35 protein, rotavirus; C022571:adenosine 5'-O-(3-thiotriphosphate); D000244:Adenosine Diphosphate; D012313:RNA; D000255:Adenosine Triphosphate; D008274:Magnesium