ASAP: analysis of peptide composition.
ASAP is a web tool designed to search for specific dipeptides, tripeptides and tetrapeptides in a protein sequence database. The server allows for: (a) identification of frequent and infrequent peptides and the creation of peptide probability tables for a given database of sequences (GenerNet program), (b) determination of the compatibility of an amino-acid sequence to the given peptide probability tables (ClonErrNet program); and (c) comparison of different protein databases based on peptide composition (CompNet program). ASAP server can be useful in protein engineering and/or protein classification studies.
Serra-Hartmann
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Institut de Biologia Fonamental, Universitat Autònoma de Barcelona, 08193 Bellaterra (Barcelona), Spain.
Rebordosa
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Piñol
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Querol
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Martí-Renom
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MA
D019295:Computational Biology; D016208:Databases, Factual; D020407:Internet; D009842:Oligopeptides / Q000737:chemistry*; D011506:Proteins / Q000737:chemistry; D016415:Sequence Alignment / Q000706:statistics & numerical data*; D020539:Sequence Analysis, Protein / Q000706:statistics & numerical data*; D012984:Software
D009842:Oligopeptides; D011506:Proteins