title: Pseudomonas frederiksbergensis sp. nov., isolated from soil at a coal gasification site.
abstract: Phenotypic and genotypic characterization indicated that a group of 29 closely related phenanthrene-degrading bacteria from a coal gasification site in Frederiksberg, Copenhagen, Denmark, belonged to the genus Pseudomonas. The strains were isolated at two sampling occasions 2 years apart. The isolates were phenotypically different from any known species of the genus Pseudomonas and were therefore subject to further identification. Colonies were smooth and pale yellowish and did not produce pigments fluorescent in UV light when grown on King's B agar. Cells were rod-shaped, approximately 0.5-0.8 x 1.5-3.0 microm, and grew at 4 and 30 degrees C, but not 37 degrees C. The bacteria were oxidase- and catalase-positive, accumulated poly-beta-hydroxybutyrate and denitrified, but did not utilize D-xylose. The mean G+C content was 59.6 mol%. Phenotypic data and 16S rDNA sequence data information for Pseudomonas amygdali and Pseudomonas corrugata, and 16S rDNA sequence data for Pseudomonas chlororaphis and Pseudomonas syringae showed close relationships to these strains. However, DNA-DNA hybridization data showed that the isolates belong to a new species, for which the name Pseudomonas frederiksbergensis sp. nov. is proposed. The type strain is JAJ28T (DSM 13022T).
authors.forename: S M
authors.initials: SM
authors.lastname: Andersen
authors.forename: K
authors.initials: K
authors.lastname: Johnsen
authors.forename: J
authors.initials: J
authors.lastname: Sørensen
authors.forename: P
authors.initials: P
authors.lastname: Nielsen
authors.forename: C S
authors.initials: CS
authors.lastname: Jacobsen
mesh_terms: D015373:Bacterial Typing Techniques; D001482:Base Composition; D003032:Coal Mining; D004275:DNA, Ribosomal / Q000032:analysis; D008854:Microscopy, Electron; D008969:Molecular Sequence Data; D009693:Nucleic Acid Hybridization; D010616:Phenanthrenes / Q000378:metabolism*; D010641:Phenotype; D010802:Phylogeny; D011549:Pseudomonas / Q000145:classification* / Q000235:genetics / Q000302:isolation & purification; D012336:RNA, Ribosomal, 16S / Q000235:genetics; D017422:Sequence Analysis, DNA; D012988:Soil Microbiology
chemical_list: D004275:DNA, Ribosomal; D010616:Phenanthrenes; D012336:RNA, Ribosomal, 16S