title: Phylogenetic analysis of Lacazia loboi places this previously uncharacterized pathogen within the dimorphic Onygenales.
abstract: Lacazia loboi is the last of the classical fungal pathogens to remain a taxonomic enigma, primarily because it has resisted cultivation and only causes cutaneous and subcutaneous infections in humans and dolphins in the New World tropics. To place it in the evolutionary tree of life, as has been done for the other enigmatic human pathogens Pneumocystis carinii and Rhinosporidium seeberi, we amplified its 18S small-subunit ribosomal DNA (SSU rDNA) and 600 bp of its chitin synthase-2 gene. Our phylogenetic analysis indicated that L. loboi is the sister taxon of the human dimorphic fungal pathogen Paracoccidioides brasiliensis and that both species belong with the other dimorphic fungal pathogens in the order Onygenales. The low nucleotide variation among three P. brasiliensis 18S SSU rDNA sequences contrasts with the surprising amount of nucleotide differences between the two sequences of L. loboi used in this study, suggesting that the nucleic acid epidemiology of this hydrophilic pathogen will be rewarding.
authors.affiliation: Medical Technology Program, Department of Microbiology, Michigan State University, East Lansing, Michigan 48824-1031, USA.
authors.forename: R A
authors.initials: RA
authors.lastname: Herr
authors.forename: E J
authors.initials: EJ
authors.lastname: Tarcha
authors.forename: P R
authors.initials: PR
authors.lastname: Taborda
authors.forename: J W
authors.initials: JW
authors.lastname: Taylor
authors.forename: L
authors.initials: L
authors.lastname: Ajello
authors.forename: L
authors.initials: L
authors.lastname: Mendoza
mesh_terms: D002687:Chitin Synthase / Q000235:genetics; D004271:DNA, Fungal / Q000032:analysis / Q000235:genetics; D004275:DNA, Ribosomal / Q000032:analysis / Q000235:genetics; D003881:Dermatomycoses / Q000382:microbiology* / Q000503:physiopathology; D005800:Genes, Fungal; D006801:Humans; D008969:Molecular Sequence Data; D009181:Mycoses / Q000382:microbiology* / Q000503:physiopathology; D020036:Onygenales / Q000145:classification* / Q000235:genetics; D010802:Phylogeny; D016133:Polymerase Chain Reaction / Q000379:methods; D012337:RNA, Ribosomal, 18S / Q000235:genetics; D017422:Sequence Analysis, DNA
chemical_list: D004271:DNA, Fungal; D004275:DNA, Ribosomal; D012337:RNA, Ribosomal, 18S; D002687:Chitin Synthase