title: Loss of genomic methylation causes p53-dependent apoptosis and epigenetic deregulation.
abstract: Cytosine methylation of mammalian DNA is essential for the proper epigenetic regulation of gene expression and maintenance of genomic integrity. To define the mechanism through which demethylated cells die, and to establish a paradigm for identifying genes regulated by DNA methylation, we have generated mice with a conditional allele for the maintenance DNA methyltransferase gene Dnmt1. Cre-mediated deletion of Dnmt1 causes demethylation of cultured fibroblasts and a uniform p53-dependent cell death. Mutational inactivation of Trp53 partially rescues the demethylated fibroblasts for up to five population doublings in culture. Oligonucleotide microarray analysis showed that up to 10% of genes are aberrantly expressed in demethylated fibroblasts. Our results demonstrate that loss of Dnmt1 causes cell-type-specific changes in gene expression that impinge on several pathways, including expression of imprinted genes, cell-cycle control, growth factor/receptor signal transduction and mobilization of retroelements.
authors.affiliation: Whitehead Institute for Biomedical Research, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA.
authors.forename: L
authors.initials: L
authors.lastname: Jackson-Grusby
authors.forename: C
authors.initials: C
authors.lastname: Beard
authors.forename: R
authors.initials: R
authors.lastname: Possemato
authors.forename: M
authors.initials: M
authors.lastname: Tudor
authors.forename: D
authors.initials: D
authors.lastname: Fambrough
authors.forename: G
authors.initials: G
authors.lastname: Csankovszki
authors.forename: J
authors.initials: J
authors.lastname: Dausman
authors.forename: P
authors.initials: P
authors.lastname: Lee
authors.forename: C
authors.initials: C
authors.lastname: Wilson
authors.forename: E
authors.initials: E
authors.lastname: Lander
authors.forename: R
authors.initials: R
authors.lastname: Jaenisch
mesh_terms: D000483:Alleles; D000818:Animals; D017209:Apoptosis; D001287:Attachment Sites, Microbiological / Q000235:genetics; D002455:Cell Division; D002461:Cell Line, Transformed; D002478:Cells, Cultured; D000076123:DNA (Cytosine-5-)-Methyltransferase 1; D004248:DNA (Cytosine-5-)-Methyltransferases / Q000235:genetics / Q000378:metabolism; D019175:DNA Methylation; D019143:Evolution, Molecular; D005347:Fibroblasts; D017353:Gene Deletion; D020869:Gene Expression Profiling; D005786:Gene Expression Regulation; D007426:Genes, Intracisternal A-Particle / Q000235:genetics; D016678:Genome; D018392:Genomic Imprinting; D019426:Integrases / Q000235:genetics / Q000378:metabolism; D051379:Mice; D020411:Oligonucleotide Array Sequence Analysis; D012333:RNA, Messenger / Q000032:analysis / Q000235:genetics; D011995:Recombination, Genetic / Q000235:genetics; D013234:Stem Cells / Q000201:enzymology / Q000378:metabolism; D016159:Tumor Suppressor Protein p53 / Q000378:metabolism*; D014764:Viral Proteins
chemical_list: D012333:RNA, Messenger; D016159:Tumor Suppressor Protein p53; D014764:Viral Proteins; D000076123:DNA (Cytosine-5-)-Methyltransferase 1; D004248:DNA (Cytosine-5-)-Methyltransferases; C000619381:Dnmt1 protein, mouse; C045073:Cre recombinase; D019426:Integrases