title: Identification of a novel mammalian endoplasmic reticulum-resident KDEL protein using an EST database motif search.
abstract: Several endoplasmic reticulum (ER)-resident proteins contain a unique C-terminal sequence (KDEL) which is required for the retention of these proteins in the ER. By searching a mouse EST database for records containing the nucleotide sequence encoding the KDEL motif, we extracted cDNAs encoding putative novel ER-resident proteins in addition to all of the known ER proteins bearing the KDEL motif. Using the sequence information obtained by this database search, we cloned the cDNA encoding a novel KDEL motif-bearing protein, ER protein 58 (EP58), sharing no significant homology to any of the known ER-resident proteins. Subcellular localization of EP58 in the ER was confirmed by cytoimmunofluorescence studies using epitope-tagged EP58. The EP58 gene was primarily expressed in embryo, placenta, and adult heart. Neither heat shock nor ER stress as tested here was sufficient to induce expression of the EP58 gene. A putative role of the N-terminal half of EP58 in protein-protein interaction is suggested by its similarity to the filamin rod domain. Similarity of the EP58 sequence with bacterial and fungus proteins suggests a possible role for EP58 in polysaccharide biosynthesis.
authors.affiliation: Research and Education Center for Genetic Information, Nara Institute of Science and Technology, 8916-5 Takayama, Ikoma, 630-0101, Nara, Japan.
authors.forename: Y
authors.initials: Y
authors.lastname: Kimata
authors.forename: K
authors.initials: K
authors.lastname: Ooboki
authors.forename: C
authors.initials: C
authors.lastname: Nomura-Furuwatari
authors.forename: A
authors.initials: A
authors.lastname: Hosoda
authors.forename: A
authors.initials: A
authors.lastname: Tsuru
authors.forename: K
authors.initials: K
authors.lastname: Kohno
mesh_terms: D000595:Amino Acid Sequence; D000818:Animals; D001483:Base Sequence; D015153:Blotting, Western; D019556:COS Cells; D002460:Cell Line; D018076:DNA, Complementary / Q000737:chemistry / Q000235:genetics; D004274:DNA, Recombinant; D016208:Databases, Factual; D004622:Embryo, Mammalian / Q000378:metabolism; D004721:Endoplasmic Reticulum / Q000378:metabolism*; D020224:Expressed Sequence Tags; D005260:Female; D015870:Gene Expression; D018507:Gene Expression Regulation, Developmental; D008297:Male; D008565:Membrane Proteins / Q000235:genetics; D051379:Mice; D018613:Microscopy, Confocal; D008969:Molecular Sequence Data; D009842:Oligopeptides; D010455:Peptides / Q000235:genetics / Q000378:metabolism; D010957:Plasmids / Q000235:genetics; D012313:RNA / Q000235:genetics / Q000378:metabolism; D018000:Receptors, Peptide / Q000235:genetics* / Q000378:metabolism; D020133:Reverse Transcriptase Polymerase Chain Reaction; D017422:Sequence Analysis, DNA; D012984:Software; D014018:Tissue Distribution
chemical_list: D018076:DNA, Complementary; D004274:DNA, Recombinant; C064459:KDEL receptor; D008565:Membrane Proteins; D009842:Oligopeptides; D010455:Peptides; C422542:Poglut2 protein, mouse; D018000:Receptors, Peptide; D012313:RNA; C085706:FLAG peptide