title: Molecular phylogeny of western Atlantic Farfantepenaeus and Litopenaeus shrimp based on mitochondrial 16S partial sequences.
abstract: Partial sequences for the 16S rRNA mitochondrial gene were obtained from 10 penaeid shrimp species: Farfantepenaeus paulensis, F. brasiliensis, F. subtilis, F. duorarum, F. aztecus, Litopenaeus schmitti, L. setiferus, and Xiphopenaeus kroyeri from the western Atlantic and L. vannamei and L. stylirostris from the eastern Pacific. Sequences were also obtained from an undescribed morphotype of pink shrimp (morphotype II) usually identified as F. subtilis. The phylogeny resulting from the 16S partial sequences showed that these species form two well-supported monophyletic clades consistent with the two genera proposed in a recent systematic review of the suborder Dendrobranchiata. This contrasted with conclusions drawn from recent molecular phylogenetic work on penaeid shrimps based on partial sequences of the mitochondrial COI region that failed to support recent revisions of the Dendrobranchiata based on morphological analysis. Consistent differences observed in the sequences for morphotype II, coupled with previous allozyme data, support the conclusion that this is a previously undescribed species of Farfantepenaeus.
authors.affiliation: School of Ocean and Earth Science, Southampton Oceanography Centre, University of Southampton, European Way, Southampton SO14 3ZH, United Kingdom.
authors.forename: R
authors.initials: R
authors.lastname: Maggioni
authors.forename: A D
authors.initials: AD
authors.lastname: Rogers
authors.forename: N
authors.initials: N
authors.lastname: Maclean
authors.forename: F
authors.initials: F
authors.lastname: D'Incao
mesh_terms: D000818:Animals; D001267:Atlantic Ocean; D033561:Penaeidae / Q000145:classification* / Q000235:genetics*; D010802:Phylogeny; D012313:RNA / Q000235:genetics*; D000077278:RNA, Mitochondrial; D012336:RNA, Ribosomal, 16S / Q000235:genetics*; D017422:Sequence Analysis, DNA
chemical_list: D000077278:RNA, Mitochondrial; D012336:RNA, Ribosomal, 16S; D012313:RNA