title: Structure and expression of duplicate AGAMOUS orthologues in poplar.
abstract: To investigate the homeotic systems underlying floral development in a dioecious tree, and to provide tools for the manipulation of floral development, we have isolated two Populus trichocarpa genes, PTAG1 and PTAG2, homologous to the Arabidopsis floral homeotic gene AGAMOUS (AG). PTAG1 and PTAG2 are located on separate linkage groups, but their non-coding regions are highly similar, consistent with a phylogenetically recent duplication. Intron/exon structure is conserved in relation to AG and the Antirrhinum AG orthologue, PLENA (PLE), and low-stringency Southern analysis demonstrated the absence of additional genes in the poplar genome with significant PTAG1/2 homology. PTAG1 and PTAG2 exhibit an AG-like floral expression pattern, and phylogenetic analysis of the AG subfamily strongly supports evolutionary orthology to C-class organ identity genes. The high degree of similarity shared by PTAG1 and PTAG2 in both sequence (89% amino acid identity) and expression indicates that they are unlikely to be functionally associated with specification of tree gender. Unexpectedly, PTAG transcripts were consistently detected in vegetative tissues.
authors.affiliation: Department of Forest Science, Oregon State University, Corvallis 97331, USA.
authors.forename: A M
authors.initials: AM
authors.lastname: Brunner
authors.forename: W H
authors.initials: WH
authors.lastname: Rottmann
authors.forename: L A
authors.initials: LA
authors.lastname: Sheppard
authors.forename: K
authors.initials: K
authors.lastname: Krutovskii
authors.forename: S P
authors.initials: SP
authors.lastname: DiFazio
authors.forename: S
authors.initials: S
authors.lastname: Leonardi
authors.forename: S H
authors.initials: SH
authors.lastname: Strauss
mesh_terms: D026342:AGAMOUS Protein, Arabidopsis; D000595:Amino Acid Sequence; D002874:Chromosome Mapping; D018076:DNA, Complementary / Q000737:chemistry / Q000235:genetics / Q000302:isolation & purification; D018744:DNA, Plant / Q000737:chemistry / Q000235:genetics; D004268:DNA-Binding Proteins / Q000235:genetics*; D020440:Gene Duplication; D018506:Gene Expression Regulation, Plant; D017343:Genes, Plant / Q000235:genetics*; D017403:In Situ Hybridization; D008969:Molecular Sequence Data; D010802:Phylogeny; D010940:Plant Proteins / Q000235:genetics*; D018749:RNA, Plant / Q000235:genetics / Q000378:metabolism; D016415:Sequence Alignment; D017422:Sequence Analysis, DNA; D017386:Sequence Homology, Amino Acid; D014018:Tissue Distribution; D014197:Trees / Q000235:genetics*
chemical_list: D026342:AGAMOUS Protein, Arabidopsis; D018076:DNA, Complementary; D018744:DNA, Plant; D004268:DNA-Binding Proteins; D010940:Plant Proteins; D018749:RNA, Plant