title: Crystal structure analysis of recombinant human uteroglobin and molecular modeling of ligand binding.
abstract: Uteroglobin, a steroid-inducible, cytokine-like, secreted protein with immunomodulatory properties, has been reported to bind progesterone, polychlorinated biphenyls (PCB), and retinol. Structural studies may delineate whether binding of ligands is a likely physiological function of human uteroglobin (hUG). We report a refined crystal structure of uncomplexed recombinant hUG (rhUG) at 2.5-A resolution and the results of our molecular modeling studies of ligand binding to the central hydrophobic cavity of rhUG. The crystal structure of rhUG is very similar to that of reported crystal structures of uteroglobins. Using molecular modeling techniques, the three ligands--PCB, progesterone, and retinol--were docked into the hydrophobic cavity of the dimer structure of rhUG. We undocked the progesterone ligand by pulling the ligand from the cavity into the solvent. From our modeling and undocking studies of progesterone, it is clear that these types of hydrophobic ligands could slip into the cavity between helix-3 and helix-3' of the dimer instead of between helix-1 and helix-4 of the monomer, as proposed earlier. Our results suggest that at least one of the physiological functions of UG is to bind to hydrophobic ligands, such as progesterone and retinol.
authors.affiliation: Laboratory for the Structure of Matter, Naval Research Laboratory, Washington, District of Columbia 20375-5341, USA. pattabir@ncifcrf.gov
authors.forename: N
authors.initials: N
authors.lastname: Pattabiraman
authors.forename: J H
authors.initials: JH
authors.lastname: Matthews
authors.forename: K B
authors.initials: KB
authors.lastname: Ward
authors.forename: G
authors.initials: G
authors.lastname: Mantile-Selvaggi
authors.forename: L
authors.initials: L
authors.lastname: Miele
authors.forename: A B
authors.initials: AB
authors.lastname: Mukherjee
mesh_terms: D000818:Animals; D018360:Crystallography, X-Ray / Q000379:methods; D006801:Humans; D008024:Ligands; D008958:Models, Molecular; D011485:Protein Binding / Q000502:physiology*; D017434:Protein Structure, Tertiary / Q000502:physiology*; D011994:Recombinant Proteins / Q000737:chemistry*; D014598:Uteroglobin / Q000737:chemistry*
chemical_list: D008024:Ligands; D011994:Recombinant Proteins; D014598:Uteroglobin