COMBOSA3D: combining sequence alignments with three-dimensional structures.
COMBOSA3D is a program that allows sequence conservation to be viewed in its proper three-dimensional environment. It superimposes sequence alignment information onto a protein structure using a customizable color scheme, which is also applied to a textual sequence alignment for reference.


BACKGROUND
The program can be tested at http://www.bioinformatics.org/combosa3d/, and the source code is freely available.
Department of Biological Sciences, University of Alberta, Edmonton, Alberta, T6G 2E9, Canada. stothard@ualberta.ca
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Stothard
D000818:Animals; D003198:Computer Simulation; D006801:Humans; D008958:Models, Molecular; D011487:Protein Conformation; D011506:Proteins / Q000737:chemistry*; D016415:Sequence Alignment; D012984:Software
D011506:Proteins