Trehalose effect on low temperature protein dynamics: fluctuation and relaxation phenomena.
We performed spectral diffusion experiments in trehalose-enriched glycerol/buffer-glass on horseradish peroxidase where the heme was replaced by metal-free mesoporphyrin IX, and compared them with the respective behavior in a pure glycerol/buffer-glass (Schlichter et al., J. Chem. Phys. 2000, 112:3045-3050). Trehalose has a significant influence: spectral diffusion broadening speeds up compared to the trehalose-free glass. This speeding up is attributed to a shortening of the correlation time of the frequency fluctuations most probably by preventing water molecules from leaving the protein interior. Superimposed to the frequency fluctuation dynamics is a relaxation dynamics that manifests itself as an aging process in the spectral diffusion broadening. Although the trehalose environment speeds up the fluctuations, it does not have any influence on the relaxation. Both relaxation and fluctuations are governed by power laws in time. The respective exponents do not seem to change with the protein environment. From the spectral dynamics, the mean square displacement in conformation space can be determined. It is governed by anomalous diffusion. The associated frequency correlation time is incredibly long, demonstrating that proteins at low temperatures are truly nonergodic systems.
Schlichter
J
J
Lehrstuhl für Physik Weihenstephan, Technische Universität München, D-85350 Freising, Germany.
Friedrich
J
J
Herenyi
L
L
Fidy
J
J
D001669:Biochemical Phenomena; D001671:Biochemistry; D004058:Diffusion; D005990:Glycerol / Q000737:chemistry; D006418:Heme / Q000737:chemistry; D006735:Horseradish Peroxidase / Q000737:chemistry*; D006863:Hydrogen-Ion Concentration; D007700:Kinetics; D008652:Mesoporphyrins / Q000737:chemistry; D008956:Models, Chemical; D015233:Models, Statistical; D016011:Normal Distribution; D011487:Protein Conformation; D013696:Temperature; D013997:Time Factors; D014199:Trehalose / Q000737:chemistry*
D008652:Mesoporphyrins; D006418:Heme; C031468:mesoporphyrin IX; D014199:Trehalose; D006735:Horseradish Peroxidase; D005990:Glycerol