title: Investigation of allosteric linkages in the regulation of tryptophan synthase: the roles of salt bridges and monovalent cations probed by site-directed mutation, optical spectroscopy, and kinetics.
abstract: The tryptophan synthase bienzyme complex is the most extensively documented example of substrate channeling in which the oligomeric unit has been described at near atomic resolution. Transfer of the common metabolite, indole, between the alpha- and the beta-sites occurs by diffusion along a 25-A-long interconnecting tunnel within each alphabeta-dimeric unit of the alpha(2)beta(2) oligomer. The control of metabolite transfer involves allosteric interactions that trigger the switching of alphabeta-dimeric units between open and closed conformations and between catalytic states of low and high activity. This allosteric signaling is triggered by covalent transformations at the beta-site and ligand binding to the alpha-site. The signals are transmitted between sites via a scaffolding of structural elements that includes a monovalent cation (MVC) binding site and salt bridging interactions of betaLys 167 with betaAsp 305 or alphaAsp 56. Through the combined strategies of site-directed mutations of these amino acid residues and cation substitutions at the MVC site, this work examines the interrelationship of the MVC site and the alternative salt bridges formed between Lys beta167 with Asp beta305 or Asp alpha56 to the regulation of channeling. These experiments show that both the binding of a MVC and the formation of the Lys beta167-Asp alpha56 salt bridge are important to the transmission of allosteric signals between the sites, whereas, the salt bridge between betaK167 and betaD305 appears to be only of minor significance to catalysis and allosteric regulation. The mechanistic implications of these findings both for substrate channeling and for catalysis are discussed.
authors: Department of Biochemistry, University of California at Riverside, Riverside, California 92521, USA.
authors: E
authors: E
authors: Weber-Ban
authors: O
authors: O
authors: Hur
authors: C
authors: C
authors: Bagwell
authors: U
authors: U
authors: Banik
authors: L H
authors: LH
authors: Yang
authors: E W
authors: EW
authors: Miles
authors: M F
authors: MF
authors: Dunn
mesh_terms: D000409:Alanine / Q000235:genetics; D000494:Allosteric Regulation / Q000235:genetics; D001216:Asparagine / Q000235:genetics; D001224:Aspartic Acid / Q000235:genetics; D002414:Cations, Monovalent / Q000737:chemistry; D003903:Deuterium / Q000737:chemistry; D019281:Dimerization; D004789:Enzyme Activation / Q000235:genetics; D007700:Kinetics; D008239:Lysine / Q000235:genetics; D009097:Multienzyme Complexes / Q000737:chemistry / Q000235:genetics; D016297:Mutagenesis, Site-Directed; D011188:Potassium / Q000737:chemistry; D000644:Quaternary Ammonium Compounds / Q000737:chemistry; D012486:Salmonella typhimurium / Q000201:enzymology; D012492:Salts / Q000737:chemistry*; D012964:Sodium / Q000737:chemistry; D013050:Spectrometry, Fluorescence; D013056:Spectrophotometry, Ultraviolet; D013912:Threonine / Q000235:genetics; D017186:Titrimetry; D014367:Tryptophan Synthase / Q000737:chemistry* / Q000235:genetics*
chemical_list: D002414:Cations, Monovalent; D009097:Multienzyme Complexes; D000644:Quaternary Ammonium Compounds; D012492:Salts; D013912:Threonine; D001224:Aspartic Acid; D001216:Asparagine; D012964:Sodium; D003903:Deuterium; D014367:Tryptophan Synthase; D008239:Lysine; D000409:Alanine; D011188:Potassium