title: Structure-based mutagenesis reveals distinct functions for Ras switch 1 and switch 2 in Sos-catalyzed guanine nucleotide exchange.
abstract: Ras GTPases function as binary switches in signaling pathways controlling cell growth and differentiation. The guanine nucleotide exchange factor Sos mediates the activation of Ras in response to extracellular signals. We have previously solved the crystal structure of nucleotide-free Ras in complex with the catalytic domain of Sos (Boriack-Sjodin, P. A., Margarit, S. M., Bar-Sagi, D., and Kuriyan, J. (1998) Nature 394, 337-343). The structure demonstrates that Sos induces conformational changes in two loop regions of Ras known as switch 1 and switch 2. In this study, we have employed site-directed mutagenesis to investigate the functional significance of the conformational changes for the catalytic function of Sos. Switch 2 of Ras is held in a very tight embrace by Sos, with almost every external side chain coordinated by Sos. Mutagenesis of contact residues at the switch 2-Sos interface shows that only a small set of side chains affect binding, with the most important contact being mediated by tyrosine 64, which is buried in a hydrophobic pocket of Sos in the Ras.Sos complex. Substitutions of Ras and Sos side chains that are inserted into the Mg(2+)- and nucleotide phosphate-binding site of switch 2 (Ras Ala(59) and Sos Leu(938) and Glu(942)) have no effect on the catalytic function of Sos. These results indicate that the interaction of Sos with switch 2 is necessary for tight binding, but is not the critical driving force for GDP displacement. The structural distortion of switch 1 induced by Sos is mediated by a small number of specific contacts between highly conserved residues on both Ras and Sos. Mutations of a subset of these residues (Ras Tyr(32) and Tyr(40)) result in an increase in the intrinsic rate of nucleotide dissociation from Ras and impair the binding of Ras to Sos. Based on this analysis, we propose that the interactions of Sos with the switch 1 and switch 2 regions of Ras have distinct functional consequences: the interaction with switch 2 mediates the anchoring of Ras to Sos, whereas the interaction with switch 1 leads to disruption of the nucleotide-binding site and GDP dissociation.
authors.affiliation: Department of Molecular Genetics and Microbiology and the Graduate Programs in Molecular Pharmacology and Molecular and Cellular Biology, State University of New York at Stony Brook, New York 11794-5222, USA.
authors.forename: B E
authors.initials: BE
authors.lastname: Hall
authors.forename: S S
authors.initials: SS
authors.lastname: Yang
authors.forename: P A
authors.initials: PA
authors.lastname: Boriack-Sjodin
authors.forename: J
authors.initials: J
authors.lastname: Kuriyan
authors.forename: D
authors.initials: D
authors.lastname: Bar-Sagi
mesh_terms: D019943:Amino Acid Substitution; D006153:Guanosine Diphosphate / Q000378:metabolism*; D006801:Humans; D008274:Magnesium / Q000378:metabolism; D008958:Models, Molecular; D016297:Mutagenesis, Site-Directed; D015689:Oncogene Protein p21(ras) / Q000737:chemistry / Q000378:metabolism / Q000502:physiology*; D010710:Phosphates / Q000378:metabolism; D011487:Protein Conformation
chemical_list: D010710:Phosphates; D006153:Guanosine Diphosphate; D015689:Oncogene Protein p21(ras); D008274:Magnesium