The minisatellite of the GPI/AMF/NLK/MF gene: interspecies conservation and transcriptional activity.
Minisatellites are tandemly repeated DNA sequences found throughout the genomes of all eukaryotes. They are regions often prone to instability and hence hypervariability; thus repeat unit sequence is generally not conserved beyond closely related species. We have studied the minisatellite located in intron 9 of the human glucose phosphate isomerase (GPI) gene (also known as neuroleukin, autocrine motility factor, maturation and differentiation factor) and have found, by Zoo blotting coupled with PCR amplification and DNA sequencing, that similar repeat units are present in seven other species of mammal. There is also evidence for the presence of the minisatellite in chicken. The repeat unit does not appear to be present at any other locus in these genomes. Minisatellite DNA has been reported to be involved in recombination activity, control of gene expression of nearby gene(s) (both transcriptional and translational), whilst others form protein coding regions. The high level of conservation exhibited by the GPI minisatellite, coupled with the unique location, strongly suggests a functional role. Our results from transient and stable transfections using luciferase reporter constructs have shown that the GPI minisatellite region can act to increase transcription from the SV40 promoter, CMV promoter and the human GPI promoter.
Williams
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RR
Genomics Laboratory, Division of Medical and Molecular Genetics, 7th Floor Guy's Tower, Guy's Campus, King's College London, SE1 9RT, London, UK. ruth.williams@kcl.ac.uk
Hassan-Walker
A F
AF
Lavender
F L
FL
Morgan
M
M
Faik
P
P
Ragoussis
J
J
D000818:Animals; D001483:Base Sequence; D016466:CHO Cells; D017124:Conserved Sequence; D006224:Cricetinae; D018076:DNA, Complementary; D019143:Evolution, Molecular; D005956:Glucose-6-Phosphate Isomerase / Q000235:genetics*; D006801:Humans; D018598:Minisatellite Repeats; D008969:Molecular Sequence Data; D017422:Sequence Analysis, DNA; D014158:Transcription, Genetic; D014162:Transfection
D018076:DNA, Complementary; D005956:Glucose-6-Phosphate Isomerase