title: Characterization of the Lactobacillus casei group and the Lactobacillus acidophilus group by automated ribotyping.
abstract: A total of 91 type and reference strains of the Lactobacillus casei group and the L acidophilus group were characterized by the automated ribotyping device Riboprinter microbial characterization system. The L. casei group was divided into five (C1-C5) genotypes by ribotyping. Among them, the strain of L. casei ATCC 334 was clustered to the same genotype group as most of L. paracasei strains and L casei JCM 1134T generated a riboprint pattern that was different from the type strain of L. zeae. These results supported the designation of L. casei ATCC 334 as the neotype strain, but were not consistent with the reclassification of L. casei JCM 1134T as L. zeae. The L. acidophilus group was also divided into 14 (A1-A11, B1-B3) genotypes by ribotyping. L. acidophilus, L. amylovorus, L. crispatus and L. gallinarum generated ribotype patterns that were distinct from the patterns produced by L. gasseri and L. johnsonii. This result confirmed previous data that the L. acidophilus group divided to two major clusters. Five strains of L. acidophilus and two strains of L. gasseri were correctly reidentified by ribotyping. Most strains belonging to the L. casei group and the L. acidophilus group were discriminated at the species level by automated ribotyping. Thus this RiboPrinter system yields rapid, accurate and reproducible genetic information for the identification of many strains.
authors.affiliation: Japan Collection of Microorganisms, RIKEN, Wako, Saitama.
authors.forename: C S
authors.initials: CS
authors.lastname: Ryu
authors.forename: J W
authors.initials: JW
authors.lastname: Czajka
authors.forename: M
authors.initials: M
authors.lastname: Sakamoto
authors.forename: Y
authors.initials: Y
authors.lastname: Benno
mesh_terms: D006801:Humans; D007779:Lactobacillus acidophilus / Q000145:classification* / Q000235:genetics*; D007780:Lacticaseibacillus casei / Q000145:classification* / Q000235:genetics*; D021521:Ribotyping / Q000379:methods*; D013045:Species Specificity