Characterization of a single nucleotide polymorphism in the coding sequence of the bovine transferrin gene.
A single nucleotide polymorphism was identified in the coding sequence of the bovine transferrin gene. Two alleles (SSCP1 and SSCP2) were detected by SSCP analysis and the mutation point was identified and confirmed by direct sequencing of the PCR products. The relationship between protein and DNA polymorphism was established. Protein variants A, D1 and E correspond to SSCP allele 1 and variant D2 corresponds to SSCP allele 2. DNA sequences from genotypes AA, AE, AD2, D1E, D2E and D2D2 reveal an A/G substitution at position 1455 of the cDNA which causes a Gly/Glu substitution which could be responsible for the mobility difference between D1 and D2 variants. Because of the number of variants, this suggests that other SNPs exist in the bovine transferrin gene. A linkage analysis between the SSCPs and two microsatellites (UWCA46 and CSSM019) mapped the transferrin gene to BTA1. Two-point analysis revealed a tight linkage within the transferrin protein variants and the SSCPs.
Laurent
P
P
Laboratoire de Génétique biochimique et de Cytogénétique. INRA-CRJ, 78350, Jouy en Josas, France. plaurent@biotec.jouy.inra.fr
Rodellar
C
C
D000818:Animals; D002417:Cattle / Q000235:genetics*; D004252:DNA Mutational Analysis; D008040:Genetic Linkage; D006801:Humans; D017354:Point Mutation; D016133:Polymerase Chain Reaction; D020641:Polymorphism, Single Nucleotide; D018807:Polymorphism, Single-Stranded Conformational; D016415:Sequence Alignment; D014168:Transferrin / Q000235:genetics*
D014168:Transferrin