title: Alcaligenes faecalis subsp. parafaecalis subsp. nov., a bacterium accumulating poly-beta-hydroxybutyrate from acetone-butanol bioprocess residues.
abstract: The authors have previously isolated a solvent tolerant bacterium, strain G(T), (T = type strain) capable to convert acetone-butanol bioprocess residues into poly-beta-hydroxybutyrate. Strain G(T) was initially identified as Alcaligenes spp by standard bacteriological tests. In this study the taxonomic position of the bacterium was investigated in detail. The 165 rDNA sequence analysis, the G + C content of DNA (56 mol%) and the presence of ubiquinone Q-8 confirmed strain G(T) as a representative of the genus Alcaligenes. In the polyamine pattern of the bacterium putrescine and cadaverine were detected, but only trace amounts of 2-hydroxyputrescine. The extremely low content of 2-hydroxyputrescine is remarkable, since this unique diamine is a common marker for beta-proteobacteria. Phylogenetic analyses of 16S rDNA demonstrated that Alcaligenes sp. G(T) is most closely related to the species Alcaligenes faecalis (99.6% sequence similarity to A. faecalis HR4 and 98.7% sequence similarity to A. faecalis [ATCC 8750T = DSM 30030T]. On the basis of DNA-DNA relatedness (56% similarity), the unique polyamine pattern, the physiological and biochemical differences strain G(T) could be distinguished from the species A. faecalis. Therefore, a new subspecies for the species Alcaligenes faecalis is proposed; Alcaligenes faecalis subsp. parafaecalis subsp. nov.
authors.affiliation: Institut für Mikrobiologie und Genetik, Universität Wien, Biocenter, Wien, Austria. schroll@gem.univie.ac.at
authors.forename: G
authors.initials: G
authors.lastname: Schroll
authors.forename: H J
authors.initials: HJ
authors.lastname: Busse
authors.forename: G
authors.initials: G
authors.lastname: Parrer
authors.forename: S
authors.initials: S
authors.lastname: Rölleke
authors.forename: W
authors.initials: W
authors.lastname: Lubitz
authors.forename: E B
authors.initials: EB
authors.lastname: Denner
mesh_terms: D000096:Acetone / Q000378:metabolism*; D000421:Alcaligenes / Q000145:classification* / Q000378:metabolism*; D015373:Bacterial Typing Techniques; D000440:Butanols / Q000378:metabolism*; D004275:DNA, Ribosomal / Q000235:genetics; D005285:Fermentation; D006885:Hydroxybutyrates / Q000378:metabolism*; D007218:Industrial Microbiology / Q000379:methods; D008969:Molecular Sequence Data; D011091:Polyesters / Q000378:metabolism*; D012336:RNA, Ribosomal, 16S / Q000235:genetics; D000094122:Polyhydroxybutyrates
chemical_list: D000096:Acetone; D000440:Butanols; D004275:DNA, Ribosomal; D006885:Hydroxybutyrates; D011091:Polyesters; D012336:RNA, Ribosomal, 16S; C003182:poly-beta-hydroxybutyrate; D000094122:Polyhydroxybutyrates