Elongation of the BH8 beta-hairpin peptide: Electrostatic interactions in beta-hairpin formation and stability.
An elongated version of the de novo designed beta-hairpin peptide, BH8, has allowed us to gain insight into the role of electrostatic interactions in beta-hairpin stability. A Lys-Glu electrostatic pair has been introduced by adding a residue at the beginning and at the end of the N-terminal and C-terminal strands, respectively, of the beta-hairpin structure, in both orientations. The two resulting peptides and controls having Ala residues at these positions and different combinations of Ala with Lys, or Glu residues, have been analyzed by nuclear magnetic resonance (NMR), under different pH and ionic strength conditions. All of the NMR parameters, in particular the conformational shift analysis of Calpha protons and the coupling constants, (3)J(HNalpha), correlate well and the population estimates are in reasonable agreement among the different methods used. In the most structured peptides, we find an extension of the beta-hairpin structure comprising the two extra residues. Analysis of the pH and salt dependence shows that ionic pairs contribute to beta-hairpin stability. The interaction is electrostatic in nature and can be screened by salt. There is also an important salt-independent contribution of negatively charged groups to the stability of this family of beta-hairpin peptides.
Ramírez-Alvarado
M
M
European Molecular Biology Laboratory (EMBL), 69117 Heidelberg, Germany. marina@csb.yale.edu
Blanco
F J
FJ
Serrano
L
L
D000595:Amino Acid Sequence; D006863:Hydrogen-Ion Concentration; D008958:Models, Molecular; D019906:Nuclear Magnetic Resonance, Biomolecular; D009842:Oligopeptides / Q000737:chemistry*; D009994:Osmolar Concentration; D010445:Peptide Elongation Factors / Q000737:chemistry*; D010455:Peptides; D017433:Protein Structure, Secondary / Q000187:drug effects; D011506:Proteins / Q000737:chemistry*; D012997:Solvents / Q000494:pharmacology; D055672:Static Electricity; D013816:Thermodynamics; D017186:Titrimetry; D014270:Trifluoroethanol / Q000494:pharmacology; D014867:Water / Q000494:pharmacology
C447154:BH8 beta-hairpin peptide; D009842:Oligopeptides; D010445:Peptide Elongation Factors; D010455:Peptides; D011506:Proteins; D012997:Solvents; C057342:peptide elongation factor 1H; D014867:Water; D014270:Trifluoroethanol