title: Montmorillonite catalysis of RNA oligomer formation in aqueous solution. A model for the prebiotic formation of RNA.
abstract: Oligomers of adenylic acid of up to the 11-mer in length are formed by the reaction of the phosphorimidazolide of adenosine (ImpA) in pH 8 aqueous solution at room temperature in the presence of Na(+)-montmorillonite. These oligomers are joined by phosphodiester bonds in which the 3',5'-linkage predominates over the 2',5'-linkage by a 2:1 ratio.  Reaction of a 9:1 mixture of ImpA, A5'ppA results in the formation of oligomers with a 3:1 ratio of 3',5'- to 2',5'-linked phosphodiester bonds.  A high proportion of these oligomers contain the A5'ppA grouping.  A5'ppA reacts much more rapidly with ImpA than does 5'-ADP (ppA) or 5'-ATP (pppA). The exchangeable cation associated with the montmorillonite effects the observed catalysis with Li+, Na+, NH4+, and Ca2+ being the more effective while Mg2+ and Al3+ are almost ineffective catalysts.  2',5'-Linked oligomers, up to the tetramer in length, are formed using UO2(2+)-montmorillonite.  The structure analysis of individual oligomer fractions was performed by selective enzymatic and KOH hydrolytic studies followed by HPLC analysis of the reaction products.  It is concluded from the composition of the oligomers that the rate of addition ImpA to a 3'-terminus containing a 2',5'-linkage is slower than the addition to a nucleoside joined by a 3',5'-linked phosphodiester bond.  The potential importance of mineral catalysis of the formation of RNA and other oligomers on primitive Earth is discussed.
authors.affiliation: Department of Chemistry, Rensselaer Polytechnic Institute, Troy, New York 12180-3590, USA.
authors.forename: J P
authors.initials: JP
authors.lastname: Ferris
authors.forename: G
authors.initials: G
authors.lastname: Ertem
mesh_terms: D000249:Adenosine Monophosphate / Q000031:analogs & derivatives* / Q000737:chemistry; D001546:Bentonite / Q000737:chemistry*; D002384:Catalysis; D002851:Chromatography, High Pressure Liquid; D019281:Dimerization; D004722:Endoribonucleases / Q000737:chemistry*; D019143:Evolution, Molecular; D006863:Hydrogen-Ion Concentration; D006868:Hydrolysis; D009841:Oligonucleotides / Q000138:chemical synthesis*; D012313:RNA / Q000138:chemical synthesis* / Q000737:chemistry; D014867:Water
chemical_list: D009841:Oligonucleotides; D014867:Water; D001546:Bentonite; C010671:adenosine 5'-phosphoroimidazolide; D000249:Adenosine Monophosphate; D012313:RNA; D004722:Endoribonucleases; C022543:ribonuclease T(2)