title: Composition and functional characterization of yeast 66S ribosome assembly intermediates.
abstract: The pathway and complete collection of factors that orchestrate ribosome assembly are not clear. To address these problems, we affinity purified yeast preribosomal particles containing the nucleolar protein Nop7p and developed means to separate their components. Nop7p is associated primarily with 66S preribosomes containing either 27SB or 25.5S plus 7S pre-rRNAs. Copurifying proteins identified by mass spectrometry include ribosomal proteins, nonribosomal proteins previously implicated in 60S ribosome biogenesis, and proteins not known to be involved in ribosome production. Analysis of strains mutant for eight of these proteins not previously implicated in ribosome biogenesis showed that they do participate in this pathway. These results demonstrate that proteomic approaches in concert with genetic tools provide powerful means to purify and characterize ribosome assembly intermediates.
authors.affiliation: Department of Biological Sciences, Carnegie Mellon University, Pittsburgh, PA 15213, USA.
authors.forename: P
authors.initials: P
authors.lastname: Harnpicharnchai
authors.forename: J
authors.initials: J
authors.lastname: Jakovljevic
authors.forename: E
authors.initials: E
authors.lastname: Horsey
authors.forename: T
authors.initials: T
authors.lastname: Miles
authors.forename: J
authors.initials: J
authors.lastname: Roman
authors.forename: M
authors.initials: M
authors.lastname: Rout
authors.forename: D
authors.initials: D
authors.lastname: Meagher
authors.forename: B
authors.initials: B
authors.lastname: Imai
authors.forename: Y
authors.initials: Y
authors.lastname: Guo
authors.forename: C J
authors.initials: CJ
authors.lastname: Brame
authors.forename: J
authors.initials: J
authors.lastname: Shabanowitz
authors.forename: D F
authors.initials: DF
authors.lastname: Hunt
authors.forename: J L
authors.initials: JL
authors.lastname: Woolford
mesh_terms: D002458:Cell Fractionation; D002846:Chromatography, Affinity; D005656:Fungal Proteins / Q000235:genetics / Q000302:isolation & purification / Q000378:metabolism*; D017930:Genes, Reporter; D015151:Immunoblotting; D009687:Nuclear Proteins / Q000737:chemistry / Q000235:genetics / Q000302:isolation & purification / Q000378:metabolism*; D012331:RNA, Fungal / Q000378:metabolism; D012335:RNA, Ribosomal / Q000378:metabolism; D011993:Recombinant Fusion Proteins / Q000235:genetics / Q000378:metabolism; D012270:Ribosomes / Q000737:chemistry* / Q000378:metabolism; D012441:Saccharomyces cerevisiae / Q000378:metabolism*
chemical_list: D005656:Fungal Proteins; D009687:Nuclear Proteins; D012331:RNA, Fungal; D012335:RNA, Ribosomal; D011993:Recombinant Fusion Proteins