title: Characterization and cloning of an extremely thermostable, Pyrococcus furiosus-type 4Fe ferredoxin from Thermococcus profundus.
abstract: An extremely thermostable [4Fe-4S] ferredoxin was isolated under anaerobic conditions from a hyperthermophilic archaeon Thermococcus profundus, and the ferredoxin gene was cloned and sequenced. The nucleotide sequence of the ferredoxin gene shows the ferredoxin to comprise 62 amino acid residues with a sequence similar to those of many bacterial and archaeal 4Fe (3Fe) ferredoxins. The unusual Fe-S cluster type, which was identified in the resonance Raman and EPR spectra, has three cysteines and one aspartate as the cluster ligands, as in the Pyrococcus furiosus 4Fe ferredoxin. Under aerobic conditions, a ferredoxin was purified that contains a [3Fe-4S] cluster as the major Fe-S cluster and a small amount of the [4Fe-4S] cluster. Its N-terminal amino acid sequence is the same as that of the anaerobically-purified ferredoxin up to the 26th residue. These results indicate that the 4Fe ferredoxin was degraded to 3Fe ferredoxin during aerobic purification. The aerobically-purified ferredoxin was reversibly converted back to the [4Fe-4S] ferredoxin by the addition of ferrous ions under reducing conditions. The anaerobically-purified [4Fe-4S] ferredoxin is quite stable; little degradtion was observed over 20 h at 100 degrees C, while the half-life of the aerobically-purified ferredoxin is 10 h at 100 degrees C. Both the anaerobically- and aerobically-purified ferredoxins were found to function as electron acceptors for the pyruvate-ferredoxin oxidoreductase purified from the same archaeon.
authors.affiliation: Department of Chemistry, College of Science, Rikkyo (St. Paul's) University, Toshima-ku, Tokyo 171-8501, Japan. imaitak@rikkyo.ne.jp
authors.forename: T
authors.initials: T
authors.lastname: Imai
authors.forename: K
authors.initials: K
authors.lastname: Taguchi
authors.forename: Y
authors.initials: Y
authors.lastname: Ogawara
authors.forename: D
authors.initials: D
authors.lastname: Ohmori
authors.forename: F
authors.initials: F
authors.lastname: Yamakura
authors.forename: H
authors.initials: H
authors.lastname: Ikezawa
authors.forename: A
authors.initials: A
authors.lastname: Urushiyama
mesh_terms: D000595:Amino Acid Sequence; D019843:Archaeal Proteins / Q000737:chemistry / Q000235:genetics* / Q000378:metabolism; D001483:Base Sequence; D003001:Cloning, Molecular; D004579:Electron Transport / Q000502:physiology; D004795:Enzyme Stability; D005288:Ferredoxins / Q000737:chemistry / Q000235:genetics* / Q000378:metabolism; D007506:Iron-Sulfur Proteins / Q000737:chemistry / Q000378:metabolism; D007658:Ketone Oxidoreductases / Q000378:metabolism; D008969:Molecular Sequence Data; D010100:Oxygen / Q000378:metabolism; D020027:Pyrococcus furiosus / Q000737:chemistry / Q000235:genetics; D050743:Pyruvate Synthase; D019712:Thermococcus / Q000737:chemistry / Q000235:genetics*
chemical_list: D019843:Archaeal Proteins; D005288:Ferredoxins; D007506:Iron-Sulfur Proteins; D007658:Ketone Oxidoreductases; D050743:Pyruvate Synthase; D010100:Oxygen