Tryptophan mutants of intestinal fatty acid-binding protein: ultraviolet absorption and circular dichroism studies.
An UV absorption and CD study of intestinal fatty acid-binding protein is presented. Since there are only two Trp residues in the molecule, two single-Trp mutants were prepared to deconvolute their signals. The individual contribution of the eight Phe and four Tyr residues was not established; however, Phe global contribution is relatively free of interferences from the other chromophores and was observed directly. CD spectra showed that Phe vibronic structure was unusually sharp and seems to monitor very specific details in the three-dimensional structure. The global signal from Tyr was assigned only approximately due to band broadening and overlapping. At the upper end of the CD spectrum, strong positive (1)L(b) Trp transitions from Trp 82 and strong negative (1)L(b) Trp transitions from Trp 6 were observed. (1)L(a) transitions were overall weak, positive for Trp 82 and negative for Trp 6, nearly cancelling each other out in the final spectrum. The above assignment is of practical and fundamental interest to monitor folding, binding, and molecular dynamics down to microdomain resolution. The assignment of Trp bands allowed comparison with previous data from CRABP1, another member of the IFABP family with 28% identical residues. It was found that structural homology extends beyond sequence and tertiary fold to include optical properties of equivalent Trp residues in the structure.
Clérico
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Departamento de Ciencia y Tecnología, Universidad Nacional de Quilmes, Roque Sáenz Peña 180, 1876 Bernal, Argentina.
Ermácora
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D000817:Anilino Naphthalenesulfonates / Q000494:pharmacology; D002352:Carrier Proteins / Q000235:genetics* / Q000378:metabolism*; D002942:Circular Dichroism; D004305:Dose-Response Relationship, Drug; D050556:Fatty Acid-Binding Proteins; D005456:Fluorescent Dyes / Q000494:pharmacology; D019791:Guanidine / Q000737:chemistry; D008958:Models, Molecular; D016297:Mutagenesis, Site-Directed; D009154:Mutation; D009363:Neoplasm Proteins; D011485:Protein Binding; D011487:Protein Conformation; D017510:Protein Folding; D017434:Protein Structure, Tertiary; D018168:Receptors, Retinoic Acid / Q000737:chemistry; D013053:Spectrophotometry; D013056:Spectrophotometry, Ultraviolet; D014364:Tryptophan / Q000737:chemistry / Q000378:metabolism*; D014466:Ultraviolet Rays
D000817:Anilino Naphthalenesulfonates; D002352:Carrier Proteins; D050556:Fatty Acid-Binding Proteins; D005456:Fluorescent Dyes; D009363:Neoplasm Proteins; D018168:Receptors, Retinoic Acid; C082927:retinoic acid binding protein I, cellular; C027132:1-anilino-8-naphthalenesulfonate; D014364:Tryptophan; D019791:Guanidine